Transcript Information: S_Transcript_392211.p3


Annotated TAIR IDAT1G60720.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:22357072-22357941 | Forward length=289
E-Value4E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.68590209369022
Replicate 20.22745143873727
Replicate 30.095065649915467
Condition 2: 8 Hour
Replicate 10.54962346178178
Replicate 20.8072316519489
Replicate 30.43950201247384
Condition 3: 24 Hour
Replicate 10.45040996887823
Replicate 20.7009426260726
Replicate 30.1300105381707


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_392211.p3 GENE.S_Transcript_392211~~S_Transcript_392211.p3 ORF type:complete len:194 (+),score=14.41,zf-RVT|PF13966.2|1.4e-15,zf-RVT|PF13966.2|8e+02,zf-RVT|PF13966.2|5.2e+03 S_Transcript_392211:4174-4755(+)
ATGAGACAGCTGGGCAACTTAAATAGTTCTGATGTGAGCATAAAGAAAATTTATAAAATCATTCAAGGGGAGTTTGTAAAGCTCAGTTGGAGGAATCTGGTCTGTCGTACCATTGCTAGGCCAAAAGCTGTATTTTCTTTGTGGCTTCTATTACTTAAAAGACACTATACAGTGGATAGATTAGCGAGATGGGGGATAAACCATGAAAAGAAATGCAGTCTGTGTATGATAGAGGATGAAACTCACGAGCACCTATTATGGAAATGCAAATTTACAGCTGTAAGTATGGGATGGGTCCTGACTGGTTTGAACCTCTGTACGCAGAGGAATAGAAGACCTCACAATTGGGAAGATGGGATGAAATGGATGGTAATCCATAGCAAAGGACAAAAGCCAGAGGCAGGCGTGTTTAAAGCAGCTTGTGCAGAGATCTGGTATACTATCTGGACTGAGAGAAATAGTAGACTGTTTGAGAAGAAGAAGAATTTGGCAAAGGTGGTTATACGTGACAGCCTGTATGCTATATGCTTGAGAGGATACAACCAGTTTAAGTATAGGCGTTATATAGATAATGTTCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_392211.p3 GENE.S_Transcript_392211~~S_Transcript_392211.p3 ORF type:complete len:194 (+),score=14.41,zf-RVT|PF13966.2|1.4e-15,zf-RVT|PF13966.2|8e+02,zf-RVT|PF13966.2|5.2e+03 S_Transcript_392211:4174-4755(+)
MRQLGNLNSSDVSIKKIYKIIQGEFVKLSWRNLVCRTIARPKAVFSLWLLLLKRHYTVDRLARWGINHEKKCSLCMIEDETHEHLLWKCKFTAVSMGWVLTGLNLCTQRNRRPHNWEDGMKWMVIHSKGQKPEAGVFKAACAEIWYTIWTERNSRLFEKKKNLAKVVIRDSLYAICLRGYNQFKYRRYIDNVL*

Click here to download the sequence:
Link to NCBI Protein BLAST