Transcript Information: S_Transcript_392286.p1


Annotated TAIR IDAT3G49990.1
Annotated Gene Nameunknown protein; Has 1524 Blast hits to 1298 proteins in 225 species: Archae - 9; Bacteria - 84; Metazoa - 474; Fungi - 184; Plants - 98; Viruses - 17; Other Eukaryotes - 658 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:18532492-18534000 | Reverse length=502
E-Value8E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.1418706533063
Replicate 29.7682579720295
Replicate 38.7286231846048
Condition 2: 8 Hour
Replicate 16.9999372796696
Replicate 29.7343158203391
Replicate 36.6713721511774
Condition 3: 24 Hour
Replicate 18.6712514619153
Replicate 27.4392663952896
Replicate 39.6267345057695


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_392286.p1 GENE.S_Transcript_392286~~S_Transcript_392286.p1 ORF type:3prime_partial len:131 (-),score=37.41,LTV|PF04180.10|6.8e-06 S_Transcript_392286:1-390(-)
ATGGGGAAGAAGAAGTTCATTGATAAGAAAAAAGCAGCGGTTTTCCAACTTTTTGCTAGGGATACCTCTGATCCTGCGTACAGTGAAGAGCTGGAAAATGACCGTGTATTTGTTCGAGTTGATAATAATGCTGTCACAATTCGTGGCTTGGATGAGAATGATGAAGATGCCTGTGGTGTTCCCTCGGATGATCCCAATTCAATCTTTGCTGATGCCCCTGATGACGTTGATTACAATGGGTTTAGTGACCAACCAAGAGCACCTTTACCAGATCACGTAAGGAGAGAGATATTGGAGCTCGGGTTCCCTGATGATGGTTATAATTATTTAACTCATTTGAGAGAGATTAGAAATAGAGGTGGAGGTTCTGCATATTATCACAACCCAAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_392286.p1 GENE.S_Transcript_392286~~S_Transcript_392286.p1 ORF type:3prime_partial len:131 (-),score=37.41,LTV|PF04180.10|6.8e-06 S_Transcript_392286:1-390(-)
MGKKKFIDKKKAAVFQLFARDTSDPAYSEELENDRVFVRVDNNAVTIRGLDENDEDACGVPSDDPNSIFADAPDDVDYNGFSDQPRAPLPDHVRREILELGFPDDGYNYLTHLREIRNRGGGSAYYHNPK

Click here to download the sequence:
Link to NCBI Protein BLAST