Transcript Information: S_Transcript_392440.p1


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value4E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.46285572498283
Replicate 30.3869105472084
Condition 2: 8 Hour
Replicate 10.44738581084894
Replicate 20.1564464939841
Replicate 30
Condition 3: 24 Hour
Replicate 10.15276142301115
Replicate 20.15848819284159
Replicate 30.35275586580582


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_392440.p1 GENE.S_Transcript_392440~~S_Transcript_392440.p1 ORF type:5prime_partial len:143 (+),score=29.24,RVT_1|PF00078.23|1.2e-25 S_Transcript_392440:2-430(+)
AAGCTTCTCACTAAGGTTCTGGCTAACCGTATTTGCCCTCTTTTGGACAAGCTTCTTAACCCAGCTCAATCAAGCTTTATCGAGGGTGGCAATATTACTGATAATATTGTTCTTGTTCAGGAGATGGCTCACATGATAAAGAAAGCTCCTAAAAAGAAACATATTCTCTCCCTGAAAGCTGATCTTACTAAGGCTTTTGATAGTTTGGAGTGGGACTTTATTCATGATACTCTTTGTGGATTTGGGTTCTCTCCCCGGTTCACAAGTTTGGTGATGCCTTGTATTTCCTCTCCTAAAGTCTCTGTGCTCTGGAATGGCGAAATCTCGGAATCATTTCTGCCTTCCAGGGGCATTCGTCAGGGTGATCCTCTTTCGCCTTACACTTTTGTGCTCTACATGGATCATTTGTCTCAAATGATTGAGGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_392440.p1 GENE.S_Transcript_392440~~S_Transcript_392440.p1 ORF type:5prime_partial len:143 (+),score=29.24,RVT_1|PF00078.23|1.2e-25 S_Transcript_392440:2-430(+)
KLLTKVLANRICPLLDKLLNPAQSSFIEGGNITDNIVLVQEMAHMIKKAPKKKHILSLKADLTKAFDSLEWDFIHDTLCGFGFSPRFTSLVMPCISSPKVSVLWNGEISESFLPSRGIRQGDPLSPYTFVLYMDHLSQMIEA*

Click here to download the sequence:
Link to NCBI Protein BLAST