Transcript Information: S_Transcript_392442.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value9E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.10196552197387
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.081706476310854
Replicate 20.085715895171366
Replicate 30.24500974258599
Condition 3: 24 Hour
Replicate 10.083696871611472
Replicate 20.086834527112442
Replicate 30.096636185460215


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_392442.p1 GENE.S_Transcript_392442~~S_Transcript_392442.p1 ORF type:3prime_partial len:261 (-),score=33.05,RVT_1|PF00078.23|4.9e-07 S_Transcript_392442:3-782(-)
ATGGATCGTTTATCTCAAATGATTGAGGCACAGGTGTCTAGGGGCACTTTTATTCCTGTGACTATTGACCAGCAGATTAAAGTTTCTCACATCTTCTATGCTGATGATGTCCTCCTATTTGGTAGGGCTACCCGCTCCAATGTGGAGGCAATGATTGGGGTTTTGGATAGCTTTGGTGAGCTCTCAGGTCTCTTGATTAACAAATCCAAATCCAAGATCATTTTCCCTCCATCGATGCCTCACAGGATTCGACGTCTTATAGCTGAGACTTCTAGTATTCCGGGGAGCACTTCTTTTGGCAATTATCTTGGTATTCCTCTATCTACTAGTAAACTCAAGGTGAATGAGTTCCATTTCCTCCTGGATAAAGTTAAAACCAGACTTCAAGGGTGGCAAGGGCATTTCCTCAATCTGGCTGGGAAATGCACTTTGATCAAATCTGTTCTGAGTTCTCTCCCAGCTTACACGATGCAAGTCACCAAACTCCCAACAACCATTGTCGAACATCTAGAGAAAACCTTGCGTCGCTTCCTTTGGAGCAAGTCCAATTCATCCCGTTTCTTGGCGAGGGTCAATTGGGAGGAAGTTTGTAAACCATTAGCATCGGGGGGCTTGGGGATCAGGAAGCTTAGTGTTTGGAATTTGGCTTTCCTCGCTAAGCTCGCTTGGGGATTTTTGGTAGAGGATAATAGACTTTGGGTGCGAGTTCTAAAAGCAAGATATTTGAAGAATCAGACTTTTCTTAGTGCTCTAGGCCCCTGCAATTCTTCGCACATCTGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_392442.p1 GENE.S_Transcript_392442~~S_Transcript_392442.p1 ORF type:3prime_partial len:261 (-),score=33.05,RVT_1|PF00078.23|4.9e-07 S_Transcript_392442:3-782(-)
MDRLSQMIEAQVSRGTFIPVTIDQQIKVSHIFYADDVLLFGRATRSNVEAMIGVLDSFGELSGLLINKSKSKIIFPPSMPHRIRRLIAETSSIPGSTSFGNYLGIPLSTSKLKVNEFHFLLDKVKTRLQGWQGHFLNLAGKCTLIKSVLSSLPAYTMQVTKLPTTIVEHLEKTLRRFLWSKSNSSRFLARVNWEEVCKPLASGGLGIRKLSVWNLAFLAKLAWGFLVEDNRLWVRVLKARYLKNQTFLSALGPCNSSHIW

Click here to download the sequence:
Link to NCBI Protein BLAST