Transcript Information: S_Transcript_392443.p1


Annotated TAIR IDATMG00310.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)ORF154
Annotation TypeHomolog
Chromosome PositionchrM:90883-91347 | Reverse length=154
E-Value4E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.78273533044649
Replicate 20.48667918141577
Replicate 30.13560835355589
Condition 2: 8 Hour
Replicate 10.31360868113431
Replicate 20.16449888705681
Replicate 30.7836708678302
Condition 3: 24 Hour
Replicate 10
Replicate 20.66658269342198
Replicate 30.27818431329172


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_392443.p1 GENE.S_Transcript_392443~~S_Transcript_392443.p1 ORF type:complete len:272 (-),score=33.02,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|5.8e-07 S_Transcript_392443:22-837(-)
ATGCAAGTCACCAAGCTCCCAAACACTGTTGCTGATCATCTAGAGAAATGCATGCGTCGGTTTCTTTGGAGAAAGTCTAACTCATCTCGTTTTTTGGCGAGGGTTAGTTGGGAAGAAGTTTGTAAACCCTTAGCAGCGGGGGGCTTGGGGATCAGGAGGCTTAAAGTTTGGAATATGGCTTTCCTTGCTAAGCTCGCTTGGAGATTCTTGGTGGAGGATAATAGGCTTTGGGTAAGAGTTCTTAAAGCAAGATACTTAAGGGATCAGTCTTTTCTTAGTGCCTTAGTTCCCTACAACTCTTCGCATATCTGGCGGGCTATTCTTGAGGGAAAAGAAAAACTACTTGAGGGACTAAAAGTGAGGATTGGAAACGGGCTGCATACCTCTCTTTGGTACGACTGGTGGGTGGGGGTTAAGCCTCTTGTGTACTATCTGGACTCGGATGTTCCCCTGCTTTTAGCCAATTGGCGAGTTGCTGATATTTTGGTCAATGGGTCTTGGGACTTGTCTAGAATTTCCCATCTTCTTCCTAAGGATATTCTGCTTAGCATCCAAAGTACCCCTCTTTCTTTTAATGATTCCTGCAATGACTCTCTAAGGTGGGGATTTTCTGAAAAGGGCATTGTTTCGGTTAAGTCTGTTTATAACCATCTTGCCTCTTCCTTTTCCCTGAGTTCGACATCCTTTCCTTGGAAAAAAATTTGGAAGCTTCCCATTCCGATGAAAATGCGTATGGTGACTTGGTGTCTTCTGCATGATATTCTTTCCACTGCTTCTTTCCTTAGTATCCGATTGCCAAATTTCAATCCTCAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_392443.p1 GENE.S_Transcript_392443~~S_Transcript_392443.p1 ORF type:complete len:272 (-),score=33.02,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|5.8e-07 S_Transcript_392443:22-837(-)
MQVTKLPNTVADHLEKCMRRFLWRKSNSSRFLARVSWEEVCKPLAAGGLGIRRLKVWNMAFLAKLAWRFLVEDNRLWVRVLKARYLRDQSFLSALVPYNSSHIWRAILEGKEKLLEGLKVRIGNGLHTSLWYDWWVGVKPLVYYLDSDVPLLLANWRVADILVNGSWDLSRISHLLPKDILLSIQSTPLSFNDSCNDSLRWGFSEKGIVSVKSVYNHLASSFSLSSTSFPWKKIWKLPIPMKMRMVTWCLLHDILSTASFLSIRLPNFNPQ*

Click here to download the sequence:
Link to NCBI Protein BLAST