Transcript Information: S_Transcript_392626.p1


Annotated TAIR IDAT5G11760.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1764, eukaryotic (InterPro:IPR013885); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3789754-3790299 | Forward length=181
E-Value2.4E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.9178886590735
Replicate 29.1814093189658
Replicate 39.3931947754984
Condition 2: 8 Hour
Replicate 19.2719088335361
Replicate 210.282713039377
Replicate 39.929742673128
Condition 3: 24 Hour
Replicate 18.9550454060821
Replicate 29.4315240721446
Replicate 310.809447602193


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_392626.p1 GENE.S_Transcript_392626~~S_Transcript_392626.p1 ORF type:5prime_partial len:161 (-),score=42.32,DUF1764|PF08576.6|5.5e+02,DUF1764|PF08576.6|6.9e-25 S_Transcript_392626:226-708(-)
CTCTTTCCCCTTTCCAAACAAACAAAGAGTTCCACAGTCGCCGGCGCCGGCGTGGAAGGGCTGGCCGGAAACCTAACTAGAACAAGAACTAAGGAAGAAGAACAGATCCCACCTGTAAAGATGCCTAAGAATTCTTGTTCTAAAGAGTCAACTAGCATCACCAAAGAAGAATCCAATGTTGAGCAAGAAAAACAGGGGAGTTCATCCAAAAAGGACGAAATTGATGAAATATTCTCAACCAAAAAGAGGAAAAACCCTGACAAAGAGAAGGTTGAAGGAGCTGGAGAAAAGAATGGAAAACCAAAGAAGGGTAAGAAAAAGAAGAGGAAATTCCCAAAAGAAAGCGAATTTGCGCCTGATTCGAAGCCTAGGAGAAAGACAAATGATGGGTTTACTATCTACACAGAAGAAGAGCTTGGGTTGAGCAAACAAGATGCTGGTGGAACCCCTCTTTGCCCTTTTGATTGTTCTTGTTGCTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_392626.p1 GENE.S_Transcript_392626~~S_Transcript_392626.p1 ORF type:5prime_partial len:161 (-),score=42.32,DUF1764|PF08576.6|5.5e+02,DUF1764|PF08576.6|6.9e-25 S_Transcript_392626:226-708(-)
LFPLSKQTKSSTVAGAGVEGLAGNLTRTRTKEEEQIPPVKMPKNSCSKESTSITKEESNVEQEKQGSSSKKDEIDEIFSTKKRKNPDKEKVEGAGEKNGKPKKGKKKKRKFPKESEFAPDSKPRRKTNDGFTIYTEEELGLSKQDAGGTPLCPFDCSCCF*

Click here to download the sequence:
Link to NCBI Protein BLAST