Transcript Information: S_Transcript_392745.p1


Annotated TAIR IDAT1G14790.1
Annotated Gene NameRNA-dependent RNA polymerase 1
Annotated Gene Symbol(s)RDR1, ATRDRP1
Annotation TypeOrtholog
Chromosome Positionchr1:5094317-5097817 | Reverse length=1107
E-Value4.9E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0707309117516
Replicate 23.0548477848867
Replicate 32.4117424109324
Condition 2: 8 Hour
Replicate 13.9369951354707
Replicate 25.5069165882404
Replicate 35.0830098134955
Condition 3: 24 Hour
Replicate 11.1762629571858
Replicate 23.3124032303892
Replicate 32.5222044405116


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_392745.p1 GENE.S_Transcript_392745~~S_Transcript_392745.p1 ORF type:5prime_partial len:130 (-),score=21.58 S_Transcript_392745:294-683(-)
GTCCCCTGTGCTTGCCTTGATCTAGATGAAGATGTGCCAACCAAAATGCGAATGTCCAATTCCTTCGATAGGAGGAAGGATGTGGAGGCTATTACTATGGCCGTGAGGTCCTTGAGGAAGGAAGCTAGGACTTGGTTCAATGAAAAGGGAACTGATTCGAGCTCAGGAGCTGACAATATGTATGCCAAGGCTTCAGCTTGGTATCATGTAACTTACCACCCGAGTTATTGGGGTTCGTACAATGAGGGTATGAACCGTGATCATTTCCTTAGCTTTCCATGGTGTGTGTATGACAGGCTAATCACCATCAAGAAGAACAGAATGACTGCCAGTTCCGCAGGGTTATCGTCACTGGCCCATCGATTTGGCAAGGGATTCAGTATGAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_392745.p1 GENE.S_Transcript_392745~~S_Transcript_392745.p1 ORF type:5prime_partial len:130 (-),score=21.58 S_Transcript_392745:294-683(-)
VPCACLDLDEDVPTKMRMSNSFDRRKDVEAITMAVRSLRKEARTWFNEKGTDSSSGADNMYAKASAWYHVTYHPSYWGSYNEGMNRDHFLSFPWCVYDRLITIKKNRMTASSAGLSSLAHRFGKGFSMK*

Click here to download the sequence:
Link to NCBI Protein BLAST