Transcript Information: S_Transcript_392810.p1


Annotated TAIR IDAT5G05500.1
Annotated Gene NamePollen Ole e 1 allergen and extensin family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1629716-1630267 | Forward length=183
E-Value2.2E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7651480411089
Replicate 20.33769575853339
Replicate 30.28228677678981
Condition 2: 8 Hour
Replicate 10.21760602364421
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.11563169171606
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_392810.p1 GENE.S_Transcript_392810~~S_Transcript_392810.p1 ORF type:5prime_partial len:196 (+),score=26.91,Pollen_Ole_e_I|PF01190.13|5.7e-30 S_Transcript_392810:1-588(+)
AAACGCAAGAAAAAAAAAATGGCGAGAAGTCAGAATTCATTGCTCATATTATCAGCGCTAGTTCTGCTGGCCTTCCCTTACGCAAGTGCTGAGTATCATGAAGAGCAAGCCCCACCATACCCAATGCCCAAACATACACCAAAGCCCGCTGCACCAATGATAATGGCGGATGTTGTGGTTGAAGGCATGGTGTACTGTCAGAACTGCAAATACTCGGGCACATGGTCTCTGACCGAGGCTAAGCCACTCGCAGGGGCTAAAGTCAGCGTGATCTGCAGAAACTACAAGGGGCATATCAAGTTCTACAAGAGCTTCACTACTGACGATGGAGGCTACTTCTACGCCCAGCTCGATAAGTACCATATGAGACATCATCTTCTAGACCATCCCCTTCAGTCATGTGTTGTGAAGCTGGTTTCTTCCCCTGATGATGACTGCAATGTCTTCTCCAACATCAACTACGGCATGAATGGAGCTGTACTTCGATATGAGAACAAGAGGATTAAGAATAAGGATTATGAAGCTGTGATTTATGCTGCTGGTCCTCTGGCTTTCCGCCCTGAACACTGTGCACCAATGGAGTACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_392810.p1 GENE.S_Transcript_392810~~S_Transcript_392810.p1 ORF type:5prime_partial len:196 (+),score=26.91,Pollen_Ole_e_I|PF01190.13|5.7e-30 S_Transcript_392810:1-588(+)
KRKKKKMARSQNSLLILSALVLLAFPYASAEYHEEQAPPYPMPKHTPKPAAPMIMADVVVEGMVYCQNCKYSGTWSLTEAKPLAGAKVSVICRNYKGHIKFYKSFTTDDGGYFYAQLDKYHMRHHLLDHPLQSCVVKLVSSPDDDCNVFSNINYGMNGAVLRYENKRIKNKDYEAVIYAAGPLAFRPEHCAPMEY*

Click here to download the sequence:
Link to NCBI Protein BLAST