Transcript Information: S_Transcript_392954.p1


Annotated TAIR IDAT3G09510.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:2921804-2923258 | Forward length=484
E-Value2E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.39602680409495
Replicate 20.13132612831854
Replicate 30.21955638194763
Condition 2: 8 Hour
Replicate 10
Replicate 20.13316576571266
Replicate 30.063440022633873
Condition 3: 24 Hour
Replicate 10
Replicate 20.2698072806708
Replicate 30.30026243339424


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_392954.p1 GENE.S_Transcript_392954~~S_Transcript_392954.p1 ORF type:complete len:336 (+),score=46.78,RVT_3|PF13456.2|4.1e-20,zf-RVT|PF13966.2|6.4e-14,zf-RVT|PF13966.2|1.6e+04 S_Transcript_392954:344-1351(+)
ATGGCTGATCCAAGGGCGAGCAGTAATAGCACAAGGAGCATGTGGAAGGAGCTCTGGTCACTTGATATTCCACCACGCATACGCATGTTTGGGTGGAAGGCCCTGTCCGAAGCACTGCCAACTAGAGGGGGAATTGGAAGGAGAGTGCAAAGTGGTGATATGAGTTGCGTTTGTTGCGGGGCAATGGAAGATACATGCCTACATGCCCTGCTATGGTGTCCTCTAGCAAGGGAGAAGTGGGAAGAAGGTATGTGGCCGAGGTGGATGTTGGATGGGCACTTTAGGACAATTTGGGAGTGGTGGGATGCAATCCGGTCAAATCCTTTGATGAAAGATTTTGGTCGCTTTGTGGCTGCCGTTTGGGGAGTGTGGAATGAGCGGTGTAGAATATTATATGAGGAGGGGTATGAGCAAGGCTCAACTATCATACATAATGCTTGTACCTTTGTCTCGAGATATAGGGAGGCCAAGAACCTGGAAGCACCACCCAGACCGAGAGCGGATATGCAGAGTTGGAAGCCACCTTGTGCTGGAATGTGGAAGCTAAACACGGATGCAGGAAAGCTGGATGACTGGGGAGTTGGATGGGGTTTCGTGGTGAGGGATAGTACGGGAGAAGTGGTGGAGATGGGAGTGCACCAATTCAAAGCTACGATGAATGCTGAGCTAGAAGAAGCAAGAGCACTTTTATTTGGCTTGAAGCTTGCTTGGGAGGCAGGGTATCGTTCCCTAGTAGCAGAAAGTGATTGCCTAAGTCTCATTCAAAAGCTTAAAGGTCCAACCTCAATACGCTCAACGTTGGGTTACGTTATTGAAGAAATTTTAGCTGTCTCCTTGTGTTTTGATTTTATTTCTTGGAATTATGCAACTAGGAAGGGTAATAGTGTTGCCCACAATGTAGCTAGACTTCGACCTTATATGGAGGAGGATCGTATTTGGTTAGAAGACATGCCCGTTGAGATTATAGAATTGGCGGACATGGACTATTGTAATCATTTTGCTACGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_392954.p1 GENE.S_Transcript_392954~~S_Transcript_392954.p1 ORF type:complete len:336 (+),score=46.78,RVT_3|PF13456.2|4.1e-20,zf-RVT|PF13966.2|6.4e-14,zf-RVT|PF13966.2|1.6e+04 S_Transcript_392954:344-1351(+)
MADPRASSNSTRSMWKELWSLDIPPRIRMFGWKALSEALPTRGGIGRRVQSGDMSCVCCGAMEDTCLHALLWCPLAREKWEEGMWPRWMLDGHFRTIWEWWDAIRSNPLMKDFGRFVAAVWGVWNERCRILYEEGYEQGSTIIHNACTFVSRYREAKNLEAPPRPRADMQSWKPPCAGMWKLNTDAGKLDDWGVGWGFVVRDSTGEVVEMGVHQFKATMNAELEEARALLFGLKLAWEAGYRSLVAESDCLSLIQKLKGPTSIRSTLGYVIEEILAVSLCFDFISWNYATRKGNSVAHNVARLRPYMEEDRIWLEDMPVEIIELADMDYCNHFAT*

Click here to download the sequence:
Link to NCBI Protein BLAST