Transcript Information: S_Transcript_39336.p1


Annotated TAIR IDAT5G35430.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:13662077-13665735 | Forward length=786
E-Value5.5E-214
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.24641079431
Replicate 212.933359395784
Replicate 312.390185359375
Condition 2: 8 Hour
Replicate 110.903588390448
Replicate 211.678051786968
Replicate 312.444805201006
Condition 3: 24 Hour
Replicate 112.052349512052
Replicate 211.480123343072
Replicate 310.856575594117


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39336.p1 GENE.S_Transcript_39336~~S_Transcript_39336.p1 ORF type:complete len:841 (+),score=172.48,TPR_12|PF13424.2|48,TPR_12|PF13424.2|4.1,TPR_12|PF13424.2|0.0075,TPR_12|PF13424.2|1.1,TPR_12|PF13424.2|1.2e+03,TPR_12|PF13424.2|12,TPR_12|PF13424.2|0.00019,TPR_2|PF07719.13|2.4e+02,TPR_2|PF07719.13|1.4e+02,TPR_2|PF07719.13|0.68,TPR_2|PF07719.13|3.1e+02,TPR_2|PF07719.13|7.2e+03,TPR_2|PF07719.13|1.4e+03,TPR_2|PF07719.13|27,TPR_2|PF07719.13|0.0039,TPR_2|PF07719.13|2.4e+03,TPR_11|PF13414.2|3.7e+02,TPR_11|PF13414.2|0.034,TPR_11|PF13414.2|7.8e+02,TPR_11|PF13414.2|5.4,TPR_11|PF13414.2|0.17,TPR_10|PF13374.2|4.5e+02,TPR_10|PF13374.2|2.1,TPR_10|PF13374.2|5.8e+03,TPR_10|PF13374.2|0.022,TPR_19|PF14559.2|2.3e+02,TPR_19|PF14559.2|1.2e+02,TPR_19|PF14559.2|2.3e+03,TPR_19|PF14559.2|2.2e+02,TPR_19|PF14559.2|1.1e+04,TPR_19|PF14559.2|2.1e+02,TPR_19|PF14559.2|90,TPR_19|PF14559.2|0.00013 S_Transcript_39336:400-2922(+)
ATGGATTCGCGAGATTCGTCAATTAGAGAGGGAGGTGAGGACGACGGTGCTCTCTCAGTCACTGCTTTGCTCGCTAAAGAGGCTTCCGTTTTGTTTCAATCCGATAAGTTTTCCGAATGTGCTGAGGTCTTGAATCGATTGTTGCTCAAAAAAGACGGTGATCCAAAGATTCTACATAATATTGCTGTGGTGGAATTTTTGCGGGATGGATGTTCGGATCCAAAGAAACTGATTGAAGTTCTTGTCAATGTGAAGAGAACGAGTGAAGACCTTGCTCGTGCATCTAGAGAGCAGACAGATCCTACCGTGCAGGCTGCTAATAAAGCCATTTCAGGAGCCAAAGGAACTAATAATCTGGGAAACAGTGGTAGTGTGGTCTTCACAGACGAATTTGATGCATCTGTGGCGTCACTGAACTTTGCAACTGTCCTTTTCCTCCTCCATGAATATACAAAGGCATCATCAGTTTTGGAGCCCCTATTTCAAAATATTGAACCAATAGATGAGACTACGGCTCTTCATGTTTGCCTCTTAATGCTGGATGTTGCATTGGCGGAACAAGATCCATCCAGATTTTCAGATGTAATAAATTACCTTGAAAAATCTTTTGGACTTAGTTACACACTCAATCAGGGTGATAGTGGAAGCGCAGGCCACCAACCAGCTTCAAACCTTGTTGTGAAGTCCTCTTCGACTCCCAACAACTCATCAACTGCTGATGATTTAAGCGCAGAAGGAACTGCTGCTGGAAGCGTGTCAGAAAGTTCTTTGTCTAGAACGCTCTCAGATGAAACAATTGAGTACGAGAACTTGTTGTCAACCCTGGATATTAGTGGGCAAAACATATCTCGGCCGTCTAATTTCTCATCTCAAAATGATTTCTCCAGGACGCCAGCTGATCGGTCCACTCCTACAATTAATTTGAAGCTGCAGTTGCCCCTTTACAAGATTCAGCTTTTGCTTCTCACCAGAAATCTAAAGGCAGCAAAGCGTGAAGTTAAGCTGGCAATGAACATTGCTCGCGGTATAGATTCCTCAAGGACTCTACTGCTGAAGTCGCAGCTTGAATATGCTCGTGGGAACTATCCCAAAGCGTTCAAACTTTTGAAAGCATCTAGTAACCAAGCAGATGCTGGAATTTCTATCATAATCAACAATAATATTGGGTGCATCTATTACCAACAAGGCAAGCATCACACATCTAGCATATTCTTCCACAAAGCATTAAGCAATTGTTCATCCCTCTGGAAGGAAAAGCCACGGAAGCTTGCCACATTTTCTCAGGACAAATCCTTGCTCATAGCATATAATTGTGGAATACAATACTTGGCTTGTGGCAAACCTATACTTGCAGCTCGTTGCTTCCTGAAATCAAGTTATGTTTTCTACAACAGGCCTCTCCTATGGCTCCGGCTTGGAGAATGCTGCCTAATGGCATTGGAGAAGGGGCTCTTGAAGCACACTGAAACCTCGGTACATGAATCAGAGTTTAGGGTCCAAGTCATTGGGCAAGGAAAATGGAGACAACTTGCCACAGGATGTGTTTCTTCCAGAAATGGAAATGGAAGCTCTGATGAAAAGGAGGATTCAGTTCTCGACGGTAATCTCAAGCCAAAGCTATCAATGTCGTTTGCACGTCAGTGTCTGCTGAACGCTCTTCACTTGCTATGCAGTTCTGAGTCCAAGCACTTGAAGTCGAGCTTGTCATCAAAGTCTTCTCCAGAGGAGAATGAATCAAGTGAGGCAGCAGCATCTAAGAACTTGGGCCACAAGAATTTGAGTAGCAATGATCCAAAGTCTAATTTGCCGAGCTCAGGTCAAATTACTTCAAATGGGGATGCAAGGGAACAGAGAGGTGGGGCTCATGGCAATACAGCTGCCACAAACACCATGTCTGAGTACGAGGATATCTGTAGACTAGAAAACCAGAAGATCAAGCAGGCTATTCTCATTGATCTGGCATTTGTCGAGCTGGAACTAGGGAATCCACTGAAGGCGCTGTCTACAGCTCTTTCTCTGCTGAAACTACCCGAATGCTCCAGAATGTATGCCTTTTTGGCACATGTTTATGCAGCTGAGGCCCTTTGCTTGCTCAACCGGCCAAAGGAAGCTGCCGAACATCTGTCTCCTTATTTGTCTGGCGGAAACAGTGTGGAATTGCCTTACACAGAAGAAGAGTGTCGACAATGGCAGGCAAAGAAAACCATGGATGCTGAAGAAATGACTGCTAGGGCACCACCATTTCAGGAGCAACAAGATAACATGTTTCTCAGTCCAGAAGAGGCTCGTGGGGCACTTTATGTCAATTTGGCATCCATGTACGTGATGCAAGGAGACCTCGAGCAGGCGAGCCGGTATGCAAAACAGGCTTTGGCTGCAATGCCAAACAGCCAAGAAGCTGCGCTTATGGCCGTTTACTTGGATATCAAGCTCGGCAATACCGAATCTGCTCTTGCCAAGCTAAAACGATATTGTCGGGTTAGATTCTTGCCCTTCAGTTCAAGATCCAAAACCGCTTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39336.p1 GENE.S_Transcript_39336~~S_Transcript_39336.p1 ORF type:complete len:841 (+),score=172.48,TPR_12|PF13424.2|48,TPR_12|PF13424.2|4.1,TPR_12|PF13424.2|0.0075,TPR_12|PF13424.2|1.1,TPR_12|PF13424.2|1.2e+03,TPR_12|PF13424.2|12,TPR_12|PF13424.2|0.00019,TPR_2|PF07719.13|2.4e+02,TPR_2|PF07719.13|1.4e+02,TPR_2|PF07719.13|0.68,TPR_2|PF07719.13|3.1e+02,TPR_2|PF07719.13|7.2e+03,TPR_2|PF07719.13|1.4e+03,TPR_2|PF07719.13|27,TPR_2|PF07719.13|0.0039,TPR_2|PF07719.13|2.4e+03,TPR_11|PF13414.2|3.7e+02,TPR_11|PF13414.2|0.034,TPR_11|PF13414.2|7.8e+02,TPR_11|PF13414.2|5.4,TPR_11|PF13414.2|0.17,TPR_10|PF13374.2|4.5e+02,TPR_10|PF13374.2|2.1,TPR_10|PF13374.2|5.8e+03,TPR_10|PF13374.2|0.022,TPR_19|PF14559.2|2.3e+02,TPR_19|PF14559.2|1.2e+02,TPR_19|PF14559.2|2.3e+03,TPR_19|PF14559.2|2.2e+02,TPR_19|PF14559.2|1.1e+04,TPR_19|PF14559.2|2.1e+02,TPR_19|PF14559.2|90,TPR_19|PF14559.2|0.00013 S_Transcript_39336:400-2922(+)
MDSRDSSIREGGEDDGALSVTALLAKEASVLFQSDKFSECAEVLNRLLLKKDGDPKILHNIAVVEFLRDGCSDPKKLIEVLVNVKRTSEDLARASREQTDPTVQAANKAISGAKGTNNLGNSGSVVFTDEFDASVASLNFATVLFLLHEYTKASSVLEPLFQNIEPIDETTALHVCLLMLDVALAEQDPSRFSDVINYLEKSFGLSYTLNQGDSGSAGHQPASNLVVKSSSTPNNSSTADDLSAEGTAAGSVSESSLSRTLSDETIEYENLLSTLDISGQNISRPSNFSSQNDFSRTPADRSTPTINLKLQLPLYKIQLLLLTRNLKAAKREVKLAMNIARGIDSSRTLLLKSQLEYARGNYPKAFKLLKASSNQADAGISIIINNNIGCIYYQQGKHHTSSIFFHKALSNCSSLWKEKPRKLATFSQDKSLLIAYNCGIQYLACGKPILAARCFLKSSYVFYNRPLLWLRLGECCLMALEKGLLKHTETSVHESEFRVQVIGQGKWRQLATGCVSSRNGNGSSDEKEDSVLDGNLKPKLSMSFARQCLLNALHLLCSSESKHLKSSLSSKSSPEENESSEAAASKNLGHKNLSSNDPKSNLPSSGQITSNGDAREQRGGAHGNTAATNTMSEYEDICRLENQKIKQAILIDLAFVELELGNPLKALSTALSLLKLPECSRMYAFLAHVYAAEALCLLNRPKEAAEHLSPYLSGGNSVELPYTEEECRQWQAKKTMDAEEMTARAPPFQEQQDNMFLSPEEARGALYVNLASMYVMQGDLEQASRYAKQALAAMPNSQEAALMAVYLDIKLGNTESALAKLKRYCRVRFLPFSSRSKTAS*

Click here to download the sequence:
Link to NCBI Protein BLAST