Transcript Information: S_Transcript_393531.p1


Annotated TAIR IDAT3G57200.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41451.1); Has 94 Blast hits to 94 proteins in 31 species: Archae - 0; Bacteria - 12; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:21169413-21172103 | Forward length=514
E-Value6.2E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.38292088108173
Replicate 20.15872510473032
Replicate 30.39804466367483
Condition 2: 8 Hour
Replicate 10.15342007422398
Replicate 20.16094855136494
Replicate 30.61340568647428
Condition 3: 24 Hour
Replicate 10.15715743518413
Replicate 20.16304900414638
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_393531.p1 GENE.S_Transcript_393531~~S_Transcript_393531.p1 ORF type:complete len:139 (+),score=18.82 S_Transcript_393531:92-508(+)
ATGGATGAAGCCTCAGTGTTGCACTACACATATTCAAGATTTTCAGACTTAACTTCTAGACGAAATAGGTGTGGCTGTAAGCCTACGAAGGATGATGTGAAAAGGTGTTTCATGTTAGAATTTGATAGACAAGCATTTATCATCGCTTCAACCGCAACGCAAGAAGAGATGCTTCAATGGTACCGTAAACATGTTGTGTGGCATGACGAAGCGTTAAAACTCAAATTATTGAGAAATGGTATTTTGACTCACATTTATGCTCCCATGGTCATAATTGAAGGATTAAGGGAATCAGGGGTTTTTACTTCTGTAATTGCTTCAGCAGGTTCCATTGAATCATCATCTAACACAAAGACTGATTCATCTAACAAAATTGATGGCAAGTCATTGTCAAGAAAGATTGGGCGCAAAGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_393531.p1 GENE.S_Transcript_393531~~S_Transcript_393531.p1 ORF type:complete len:139 (+),score=18.82 S_Transcript_393531:92-508(+)
MDEASVLHYTYSRFSDLTSRRNRCGCKPTKDDVKRCFMLEFDRQAFIIASTATQEEMLQWYRKHVVWHDEALKLKLLRNGILTHIYAPMVIIEGLRESGVFTSVIASAGSIESSSNTKTDSSNKIDGKSLSRKIGRKV*

Click here to download the sequence:
Link to NCBI Protein BLAST