Transcript Information: S_Transcript_39395.p1


Annotated TAIR IDAT3G54840.1
Annotated Gene NameRas-related small GTP-binding family protein
Annotated Gene Symbol(s)ARA6, ATRABF1, ARA-6, ATRAB5C
Annotation TypeOrtholog
Chromosome Positionchr3:20318597-20320782 | Forward length=202
E-Value3.6E-119
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1129.63957037335
Replicate 2120.36234699199
Replicate 3114.5823454699
Condition 2: 8 Hour
Replicate 1131.85847775297
Replicate 2125.14945031134
Replicate 3117.34268582544
Condition 3: 24 Hour
Replicate 1140.58588385036
Replicate 2120.27527727646
Replicate 3120.24172654518


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39395.p1 GENE.S_Transcript_39395~~S_Transcript_39395.p1 ORF type:complete len:202 (+),score=47.84,Ras|PF00071.18|2.5e-58,Roc|PF08477.9|3.1e-35,Roc|PF08477.9|5e+03,Arf|PF00025.17|7.9e-11,Gtr1_RagA|PF04670.8|4.8e-06,DUF258|PF03193.12|0.12,DUF258|PF03193.12|0.075 S_Transcript_39395:160-765(+)
ATGGGCTGCGCCTCCTCTTCTCCCGATAGAACTATCTCTAGACGGCCCAGTAGTCTTAATCCTGCCAGTGAGGGAGCTTCCGATGCCAAAAATTTGAAAGTTAAGCTCGTGCTACTTGGGGATTCTGGTGTTGGAAAGAGCTGTATTGTTCTCCGTTTTGTACGTGGTCAGTTTGACCCAACTTCTAAGGTGACTGTTGGAGCTTCCTTTCTCTCCCAAACGATAGCTTTGCAGGATTCTACTACTGTCAAGTTTGAAATATGGGATACTGCTGGGCAAGAAAGGTATGCTGCCCTAGCACCACTGTACTATCGAGGAGCTGCAGTTGCTGTTATTGTGTATGATATAACAAGTCCCGAGTCATTCACAAAAGCGCAATATTGGGTTAAGGAATTGCAGAAGCATGGAAGTCCTGATATAGTCATGGCTTTGGTTGGGAACAAAGCTGATCTTCAAGAACGTCGTGAAGTATCTGCACAGGATGGTATTGAATATGCGGAGAAGAATGGGATGTTCTTTATTGAGACATCTGCAAAGACAGCAGATAACATCAATCAACTTTTTGAGGAAATCGCGAAACGACTCCCTCGGCCTGCTTCTTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39395.p1 GENE.S_Transcript_39395~~S_Transcript_39395.p1 ORF type:complete len:202 (+),score=47.84,Ras|PF00071.18|2.5e-58,Roc|PF08477.9|3.1e-35,Roc|PF08477.9|5e+03,Arf|PF00025.17|7.9e-11,Gtr1_RagA|PF04670.8|4.8e-06,DUF258|PF03193.12|0.12,DUF258|PF03193.12|0.075 S_Transcript_39395:160-765(+)
MGCASSSPDRTISRRPSSLNPASEGASDAKNLKVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSPESFTKAQYWVKELQKHGSPDIVMALVGNKADLQERREVSAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPRPASS*

Click here to download the sequence:
Link to NCBI Protein BLAST