Transcript Information: S_Transcript_39396.p2


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value2E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.95730220270433
Replicate 20.63490041892129
Replicate 30.79608932734966
Condition 2: 8 Hour
Replicate 11.3807806680158
Replicate 20.64379420545976
Replicate 30.30670284323714
Condition 3: 24 Hour
Replicate 10.31431487036826
Replicate 20.65219601658554
Replicate 30.54436067061402


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39396.p2 GENE.S_Transcript_39396~~S_Transcript_39396.p2 ORF type:complete len:139 (-),score=21.67,zf-RVT|PF13966.2|8.2e-08,zf-RVT|PF13966.2|4.7e+03 S_Transcript_39396:683-1099(-)
ATGAAAGTAAGGGCTTTTGTTTGGACATTGGCCTTGGGGAAAGTCAATAATAATGATGTTCTTCAGCGAAGGTGTCCTGGAATTTGTCTATTGCCCGACATGTGTATGTTTTGCTGTGCTAGCAACGAGACTTCTGCTCATCTTTTTCTTCATTGTGAATTGGCATGTGGTATGTGGGATAGACTTTTTGGCACTTTGGGTGAGTGTTGGGTGTGTCCAAAATCTGTTTTGGATATGCTACAGCCCTGCTTTGTTGGATTTGGTCGTAGTAAGGAAAACAAAATACTGTTGCGTAATGCAATGCTTGCAATTTTGTGGTGTTTGTGGTTGGAAAGAAATGCAAGGGTTTTTTCTGGAACTGCTACGTCTCCAATCTTTCTTTGGGACCGAGTGGCTTTTCTTGCTTCCTTATGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39396.p2 GENE.S_Transcript_39396~~S_Transcript_39396.p2 ORF type:complete len:139 (-),score=21.67,zf-RVT|PF13966.2|8.2e-08,zf-RVT|PF13966.2|4.7e+03 S_Transcript_39396:683-1099(-)
MKVRAFVWTLALGKVNNNDVLQRRCPGICLLPDMCMFCCASNETSAHLFLHCELACGMWDRLFGTLGECWVCPKSVLDMLQPCFVGFGRSKENKILLRNAMLAILWCLWLERNARVFSGTATSPIFLWDRVAFLASLW*

Click here to download the sequence:
Link to NCBI Protein BLAST