Transcript Information: S_Transcript_39407.p1


Annotated TAIR IDAT1G11350.1
Annotated Gene NameS-domain-1 13
Annotated Gene Symbol(s)CBRLK1, SD1-13, RKS2
Annotation TypeHomolog
Chromosome Positionchr1:3817725-3820752 | Reverse length=830
E-Value2E-125
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5784222650002
Replicate 24.8858772722524
Replicate 34.3394673137884
Condition 2: 8 Hour
Replicate 15.8294319552025
Replicate 24.7994969400105
Replicate 34.683585892444
Condition 3: 24 Hour
Replicate 16.7273170611172
Replicate 25.0189755740008
Replicate 34.3200387475891


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39407.p1 GENE.S_Transcript_39407~~S_Transcript_39407.p1 ORF type:3prime_partial len:578 (+),score=93.43,B_lectin|PF01453.20|6.7e-30,S_locus_glycop|PF00954.16|3.3e+03,S_locus_glycop|PF00954.16|1.5e-27,S_locus_glycop|PF00954.16|6.1e+03,PAN_2|PF08276.7|9.9e+03,PAN_2|PF08276.7|1.3e-17 S_Transcript_39407:196-1926(+)
ATGAATTATGTGTGTGTATTTGTCCTGTTCTTACTAAGTATTGGTTCAGAATTCTGTTCTGCTGTAGATAATTTTACCTCAGCTAAGTTTCTGAAAGACCCAGAATCATTAGTCTCAAATAACAGTAACTTCAGACTAGGATTTTTCAGCCCTCCGAATTCGACAAATCGTTATGTAGGGATCTGGTATTATAAACCTTCTGTAATGGAGGTTGTATGGGTAGCTAACAGGAACAATCCCCTCACTGATTCATCTGGTGTGCTAGAATTATCAGATGATGGAAATCTCCAACTCTCTAATTCAAAGAATCAGACCCTTTGGTCATCAAATGTCACACATTCCGTCGCTCGGTTTTCAGTTGCACAACTTCTGGATACTGGTAACCTGGTTGTGCAAGGATTTGTATCAGATACAGATCAAGTTAATGGAACAGTCATATGGCAGAGTTTTCAGAATCCTACAGACTCGCTCTTGCCGAATATGAAGATTAATTTATCATACAAGTCTAATTTGTTACATCTCCTGCAATCTTGGAATAGCCCTTCTGATCCATCTAGTGGGAGATTCTCAGCTGGTGCTAATTCTATCAGCTTGTTTCAGATTGTAGTCTGGGATGGTGATCGCCTGTATTGGAGAAGTGGCCCTTGGAATGGGAACATCTTTGTTGGGACAAGATATCAAAATCTTGGGTATGGTAATATCTTTGTCAATGCTGGGTTTTTGACCCAGGATAATGGAGGAGGAACAACTTCCCTTGTTTTTGCTGGAGCAGATCCAAATTTGTTTTCACATTATGTGTTAAGCTACGAGGGAACAGTGGCTCAAAAATGGTGGAATAGTAGTAGAAACATCTGGGAAATCACATGGAAAGCACCAGCTACAGAATGTGATGTTTATGGTAAATGTGGGGAATTTGGGAGCTGCAATCCTTGGAAGTCACCGATTTGCAGCTGTTTGAGAGGGTTTGAGCCGAAGAATAGGGAGGAATGGAGGCGGGGAAATTGGACAAGTGGGTGTGTAAGAAGAAAGCAATTGGAATGCCAAATTCAAGGGGGAAAAGAAGATGGGTTTCTAAGACTACAGAAGATGAAAGTTCCTGACCATGCTGAGTGGACTATAGGGCTAAACATAGATCAGTGCAGGAACAAATGCTTGAACAATTGCTCTTGTTTGGCTTATTCATATGATACTGGTATCGCGTGTATGACATGGAGTGGGACTTTGATTGACATTGCAGACCTTTCCCCTGGTGGGGTGGATCTCTTTATTCGCCTGCCACCATCCGAGCTAGCTAAAAATAACAGAAGACTCAAAGCAATCATTGCAGTAAGTGTGATTTTGGGGGTAGGAGCAGTAGCTGCCATCATATGGTTCATATGGAAATGGATAGCTCAACTGAAGGGTAAAGTGCCCCGAGACATGCACAATAAACCCACATTTTCACCAAGAAAGGAAGTTGTGAAGATGAAAGCAAGACCAGACCCATATTTGTTTCGAGACCAAAGCCATGTTCAGATTGATGACGACTTGCAGTTACTTAAATTTGGAAAGCTGGCTGAAGCAACAAACAGTTTCCACAAAAGTAACTTGCTCGGATCAGGGGGATTTGGTCAAGTTTACAAGGGAAAATTGGAAGATGGACAAGAAATAGCAGTGAAAAGGCTTTCGAGAGCATCTGGACAGGGCATTGAAGAGTTTATGAATGAAGTGGTGGTGATCTCAAAACTTCAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39407.p1 GENE.S_Transcript_39407~~S_Transcript_39407.p1 ORF type:3prime_partial len:578 (+),score=93.43,B_lectin|PF01453.20|6.7e-30,S_locus_glycop|PF00954.16|3.3e+03,S_locus_glycop|PF00954.16|1.5e-27,S_locus_glycop|PF00954.16|6.1e+03,PAN_2|PF08276.7|9.9e+03,PAN_2|PF08276.7|1.3e-17 S_Transcript_39407:196-1926(+)
MNYVCVFVLFLLSIGSEFCSAVDNFTSAKFLKDPESLVSNNSNFRLGFFSPPNSTNRYVGIWYYKPSVMEVVWVANRNNPLTDSSGVLELSDDGNLQLSNSKNQTLWSSNVTHSVARFSVAQLLDTGNLVVQGFVSDTDQVNGTVIWQSFQNPTDSLLPNMKINLSYKSNLLHLLQSWNSPSDPSSGRFSAGANSISLFQIVVWDGDRLYWRSGPWNGNIFVGTRYQNLGYGNIFVNAGFLTQDNGGGTTSLVFAGADPNLFSHYVLSYEGTVAQKWWNSSRNIWEITWKAPATECDVYGKCGEFGSCNPWKSPICSCLRGFEPKNREEWRRGNWTSGCVRRKQLECQIQGGKEDGFLRLQKMKVPDHAEWTIGLNIDQCRNKCLNNCSCLAYSYDTGIACMTWSGTLIDIADLSPGGVDLFIRLPPSELAKNNRRLKAIIAVSVILGVGAVAAIIWFIWKWIAQLKGKVPRDMHNKPTFSPRKEVVKMKARPDPYLFRDQSHVQIDDDLQLLKFGKLAEATNSFHKSNLLGSGGFGQVYKGKLEDGQEIAVKRLSRASGQGIEEFMNEVVVISKLQ

Click here to download the sequence:
Link to NCBI Protein BLAST