Transcript Information: S_Transcript_39409.p1


Annotated TAIR IDAT1G11350.1
Annotated Gene NameS-domain-1 13
Annotated Gene Symbol(s)CBRLK1, SD1-13, RKS2
Annotation TypeHomolog
Chromosome Positionchr1:3817725-3820752 | Reverse length=830
E-Value4E-96
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7292103641654
Replicate 25.4805655588731
Replicate 37.1264924993955
Condition 2: 8 Hour
Replicate 17.6065086481494
Replicate 26.982296709214
Replicate 34.118348475697
Condition 3: 24 Hour
Replicate 18.3019833223277
Replicate 23.1277022345278
Replicate 32.3026494892144


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39409.p1 GENE.S_Transcript_39409~~S_Transcript_39409.p1 ORF type:complete len:471 (+),score=51.45,S_locus_glycop|PF00954.16|6.9e+03,S_locus_glycop|PF00954.16|1.4e-27,S_locus_glycop|PF00954.16|1.6e+04,B_lectin|PF01453.20|3.4e-25,PAN_2|PF08276.7|7.5e+03,PAN_2|PF08276.7|6e-16 S_Transcript_39409:210-1622(+)
ATGGCTCTATTTCACTCGTTCCTTCTTCTGTTGTCATGGTTAAGTACCTTATCCAAAGCCATAGACAAATTTACGACAACTGAATTCCTTAGTGACCTTGATTCTATAATTTCGAATAATGGCCAGTACAAGCTTGGATTCTTTAGTCCCCCTAACACCAACAATCGTTATATTGGAATTTGGTACAATCAGGTCTCAGCAACAGATGTCTTCTGGGTAGCAAATCGAAATAACCCAGTTAATGATTCTTCTGGTGTCTTGAAAATAGCTGAAGATGGCAATCTCCAGGTTTTGAATGGACGAAAGGACATCCTTTGGTCAACCAACATATCTGTTCCTAATGCTATAAATACTTCCGTATCTGCAAAGCTTTTAGATATTGGAAATCTCATCTTGATTGCATACGACACCAATGGTGAGTCCAGTACCAATGGAACTATCCTATGGCAAAGTTTTGATCACCCTGTAGACTCAATTTTGCCAAACACGATATTGGCCTTTACAAAATCCAATATGAAGCAAGCTTTGAGACCCTGGAAAAGTCCTGAAGATCCTTCATATGGGATATTCTCACTTGGAACCGATTCTTTTTCTCATCCTCAAGTTGTTATTTGGAAAGGTGATCATTATCAACCACATTGGCGTAGTGGTCCTTGGAATGGTAATATATTTTTGGGATTGTTGTATGCTGATGCAGCTACTAACTATGCTAATACCCGCATTCAAAATGACAAGGAAGGCGCAATTGATTTGGCCTACTCTGGTGCAAGTACGCTGGCTTTTTCACACTATGAGTTTAGCTATAATGGAACAATAAGCGAGAAATATTGGGATGGAGATAAGGGTAAATGGCAGTTTGTGTGGCAAGCCCCACAAACTACATGTGATCTTTATGGTAATTGTGGAGCATTTGGAACTTGTAACACTTTACGTTCTCCAGTTTGTCAATGTTTGAAGGGCTTCATGCCTAAGAATGCGGAAGAATGGAGAAAAGGTGATTGGTCTAGTGGTTGTGTACGAGCATTACCATTGCAATGTGGCATTCAAGGTAGCAAAGAAGATGGCTTTTTAACACTAAAGAATGTTAAAGTGCCAGATCATGCAGAATGGTATGTTGGATTGAATCAAGTAGATTGTAGAAACCACTGCTTGAAAAATTGTTCTTGTCTATGTTATGCTTATGATGCTGGTGCTGGATGCATGCACTGGAGCAAAGACTTAATTGACATTCAAGAATTCCCTTTTGGTGGAGTGAATCTTTATCTTCGTCTTCCATATTCGGAGCTTAGTAAAATGCCTTCTTACCTTTTTTTCCCATTTTTAAAAAGTAGAGTTTGTTTAGCTTTTTCAAATATTTTCCATAACTGTGTGAATCTTTTTAGATACTTCATTCACCATGGTTTATTGATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39409.p1 GENE.S_Transcript_39409~~S_Transcript_39409.p1 ORF type:complete len:471 (+),score=51.45,S_locus_glycop|PF00954.16|6.9e+03,S_locus_glycop|PF00954.16|1.4e-27,S_locus_glycop|PF00954.16|1.6e+04,B_lectin|PF01453.20|3.4e-25,PAN_2|PF08276.7|7.5e+03,PAN_2|PF08276.7|6e-16 S_Transcript_39409:210-1622(+)
MALFHSFLLLLSWLSTLSKAIDKFTTTEFLSDLDSIISNNGQYKLGFFSPPNTNNRYIGIWYNQVSATDVFWVANRNNPVNDSSGVLKIAEDGNLQVLNGRKDILWSTNISVPNAINTSVSAKLLDIGNLILIAYDTNGESSTNGTILWQSFDHPVDSILPNTILAFTKSNMKQALRPWKSPEDPSYGIFSLGTDSFSHPQVVIWKGDHYQPHWRSGPWNGNIFLGLLYADAATNYANTRIQNDKEGAIDLAYSGASTLAFSHYEFSYNGTISEKYWDGDKGKWQFVWQAPQTTCDLYGNCGAFGTCNTLRSPVCQCLKGFMPKNAEEWRKGDWSSGCVRALPLQCGIQGSKEDGFLTLKNVKVPDHAEWYVGLNQVDCRNHCLKNCSCLCYAYDAGAGCMHWSKDLIDIQEFPFGGVNLYLRLPYSELSKMPSYLFFPFLKSRVCLAFSNIFHNCVNLFRYFIHHGLLM*

Click here to download the sequence:
Link to NCBI Protein BLAST