Transcript Information: S_Transcript_39410.p1


Annotated TAIR IDAT4G03230.1
Annotated Gene NameS-locus lectin protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:1419278-1422828 | Reverse length=1010
E-Value8.7E-82
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.209301544447
Replicate 216.010165873595
Replicate 316.511417113194
Condition 2: 8 Hour
Replicate 116.733197121998
Replicate 217.224343642975
Replicate 316.222680478127
Condition 3: 24 Hour
Replicate 113.596667895326
Replicate 213.571544985246
Replicate 312.276216303375


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39410.p1 GENE.S_Transcript_39410~~S_Transcript_39410.p1 ORF type:3prime_partial len:678 (+),score=85.90,Pkinase|PF00069.21|1.3e-36,Pkinase_Tyr|PF07714.13|1.8e+03,Pkinase_Tyr|PF07714.13|6.7e-36,S_locus_glycop|PF00954.16|2.5e-27,S_locus_glycop|PF00954.16|1.6e+04,B_lectin|PF01453.20|6.1e-25,PAN_2|PF08276.7|1.6e+04,PAN_2|PF08276.7|1e-15 S_Transcript_39410:223-2253(+)
ATGGCTCTATTTCACTCGTTCCTTCTTCTGTTGTCATGGTTAAGTACCTTATCCAAAGCCATAGACAAATTTACGACAACTGAATTCCTTAGTGACCTTGATTCTATAATTTCGAATAATGGCCAGTACAAGCTTGGATTCTTTAGTCCCCCTAACACCAACAATCGTTATATTGGAATTTGGTACAATCAGGTCTCAGCAACAGATGTCTTCTGGGTAGCAAATCGAAATAACCCAGTTAATGATTCTTCTGGTGTCTTGAAAATAGCTGAAGATGGCAATCTCCAGGTTTTGAATGGACGAAAGGACATCCTTTGGTCAACCAACATATCTGTTCCTAATGCTATAAATACTTCCGTATCTGCAAAGCTTTTAGATATTGGAAATCTCATCTTGATTGCATACGACACCAATGGTGAGTCCAGTACCAATGGAACTATCCTATGGCAAAGTTTTGATCACCCTGTAGACTCAATTTTGCCAAACACGATATTGGCCTTTACAAAATCCAATATGAAGCAAGCTTTGAGACCCTGGAAAAGTCCTGAAGATCCTTCATATGGGATATTCTCACTTGGAACCGATTCTTTTTCTCATCCTCAAGTTGTTATTTGGAAAGGTGATCATTATCAACCACATTGGCGTAGTGGTCCTTGGAATGGTAATATATTTTTGGGATTGTTGTATGCTGATGCAGCTACTAACTATGCTAATACCCGCATTCAAAATGACAAGGAAGGCGCAATTGATTTGGCCTACTCTGGTGCAAGTACGCTGGCTTTTTCACACTATGAGTTTAGCTATAATGGAACAATAAGCGAGAAATATTGGGATGGAGATAAGGGTAAATGGCAGTTTGTGTGGCAAGCCCCACAAACTACATGTGATCTTTATGGTAATTGTGGAGCATTTGGAACTTGTAACACTTTACGTTCTCCAGTTTGTCAATGTTTGAAGGGCTTCATGCCTAAGAATGCGGAAGAATGGAGAAAAGGTGATTGGTCTAGTGGTTGTGTACGAGCATTACCATTGCAATGTGGCATTCAAGGTAGCAAAGAAGATGGCTTTTTAACACTAAAGAATGTTAAAGTGCCAGATCATGCAGAATGGTATGTTGGATTGAATCAAGTAGATTGTAGAAACCACTGCTTGAAAAATTGTTCTTGTCTATGTTATGCTTATGATGCTGGTGCTGGATGCATGCACTGGAGCAAAGACTTAATTGACATTCAAGAATTCCCTTTTGGTGGAGTGAATCTTTATCTTCGTCTTCCATATTTGGAGCTTAGTAAGAAAAGCAACAAAAATGTTGTTATTGCAGTTCCAGTTATCCTAGGCACAATTGCGATTGTCATTTTAATATACTTCTTATGGAGATGGATAACTCAAAAAAGAGGTAAGAAGGTTGAAAATAAGAAGAAACTATTGGATATTGTGACGCATGATACTAGGAATCAAGTACAACTTGAAGATCTAGCATTATTTAAATTGCAAACAATTGCAACTGCAACGAATAATTTTCAAGATAAGAACAAATTAGGTCAAGGTGGTTTTGGTCCAGTTTACAAGGGAAAATTGGAAGATGGGCAAGAGATTGCAGTAAAAAGACTTTCTACTGTTTCAGGACAAGGGCTAGAAGAGTTCATGAATGAAGTGGTGGTTATTTCGAAACTCCAACATAGAAACCTTGTAAGACTTTTGGGTTGTTGCGTAGAAAGAGAGGAAAAAATCCTGATTTATGAGTTCATGCCTAACAAGAGCTTGGACTCCTTTTTATTTGATCCATTCAAACGAGAATGTCTTAATTGGGATAGGAGGTTTAACATTATCGAAGGCATAAGTCGAGGGCTTGTTTATCTCCACAGAGATTCTCGATTGAGAATTATCCACAGAGATCTTAAGGCAAGTAATATTTTATTGGATGAAGATCTGAATCCCAAAATCTCAGACTTTGGCATGGCTCGAATCTTCAACAACAAACAGGATCAAGATAATACTAGAAGGGTAGTTGGAACATATGGGTATATGTCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39410.p1 GENE.S_Transcript_39410~~S_Transcript_39410.p1 ORF type:3prime_partial len:678 (+),score=85.90,Pkinase|PF00069.21|1.3e-36,Pkinase_Tyr|PF07714.13|1.8e+03,Pkinase_Tyr|PF07714.13|6.7e-36,S_locus_glycop|PF00954.16|2.5e-27,S_locus_glycop|PF00954.16|1.6e+04,B_lectin|PF01453.20|6.1e-25,PAN_2|PF08276.7|1.6e+04,PAN_2|PF08276.7|1e-15 S_Transcript_39410:223-2253(+)
MALFHSFLLLLSWLSTLSKAIDKFTTTEFLSDLDSIISNNGQYKLGFFSPPNTNNRYIGIWYNQVSATDVFWVANRNNPVNDSSGVLKIAEDGNLQVLNGRKDILWSTNISVPNAINTSVSAKLLDIGNLILIAYDTNGESSTNGTILWQSFDHPVDSILPNTILAFTKSNMKQALRPWKSPEDPSYGIFSLGTDSFSHPQVVIWKGDHYQPHWRSGPWNGNIFLGLLYADAATNYANTRIQNDKEGAIDLAYSGASTLAFSHYEFSYNGTISEKYWDGDKGKWQFVWQAPQTTCDLYGNCGAFGTCNTLRSPVCQCLKGFMPKNAEEWRKGDWSSGCVRALPLQCGIQGSKEDGFLTLKNVKVPDHAEWYVGLNQVDCRNHCLKNCSCLCYAYDAGAGCMHWSKDLIDIQEFPFGGVNLYLRLPYLELSKKSNKNVVIAVPVILGTIAIVILIYFLWRWITQKRGKKVENKKKLLDIVTHDTRNQVQLEDLALFKLQTIATATNNFQDKNKLGQGGFGPVYKGKLEDGQEIAVKRLSTVSGQGLEEFMNEVVVISKLQHRNLVRLLGCCVEREEKILIYEFMPNKSLDSFLFDPFKRECLNWDRRFNIIEGISRGLVYLHRDSRLRIIHRDLKASNILLDEDLNPKISDFGMARIFNNKQDQDNTRRVVGTYGYMS

Click here to download the sequence:
Link to NCBI Protein BLAST