Transcript Information: S_Transcript_394122.p1


Annotated TAIR IDAT1G22060.1
Annotated Gene NameLOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: FBD, F-box and Leucine Rich Repeat domains containing protein (TAIR:AT1G22000.1); Has 84739 Blast hits to 38714 proteins in 2257 species: Archae - 1436; Bacteria - 11314; Metazoa - 40747; Fungi - 7706; Plants - 4675; Viruses - 308; Other Eukaryotes - 18553 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:7773373-7780586 | Reverse length=1999
E-Value2E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6091582142202
Replicate 20.92355863264016
Replicate 33.431206713228
Condition 2: 8 Hour
Replicate 13.868326615666
Replicate 23.7459839582798
Replicate 32.9743043169741
Condition 3: 24 Hour
Replicate 12.5401027314644
Replicate 21.2649569251915
Replicate 31.2904301788664


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_394122.p1 GENE.S_Transcript_394122~~S_Transcript_394122.p1 ORF type:3prime_partial len:215 (-),score=42.38,NT-C2|PF10358.5|6.5e-17 S_Transcript_394122:2-643(-)
ATGTTCAAATTGCACAAGCACAAGTCTGGTATTAAATCTCGGAATAAATTTGATTTCAAGTTTTCCAGCTTTCAGGCTAATCAGGTACCAAAAGGATGGGACAAACTTTTTGTGTCTTTAGTCTTGTTGGAAACTGGGAAGACAATTGGTAAATTAGGAAGAACTTCTGTAAGAAATGGAACTTGTCGTTGGACAGAGACATTATCGGAGTCGGTATTCATCCCTCAAGATAACGGGAATTCAAAAGAGCTTGAAACCTGCATCTTCAAATTTGTTGTTGCCATGGGTTCATCTCGTTCCGGCATCCTTGGGGAGGTTTCGGTCAATCTGGCAGACTACATGAATTCAAGGACTTCCACTCCTCTTTCATTGCAGTTAAAAAAATGCAACTACAGTACAACTTTACAGTTCAAAGTGCAGTGCTTATCAGAGAAACGGAAGCATAGGGATAGACAGATCAAAGAGGCTGATTCAGATCATGATGATGTGGAAACCAAATCCGATGCATCTGATAGTGCATTTTCCAGGAGTTTGGGCTCCACTTCTAGCAACCATTTGGAAAGTGCTTCAGCATCACAAGCAGGTTTTAGTAGGGATTCTAGAGATGAGAACAAGGATTATAAGTTGAAAATTCAAACCCTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_394122.p1 GENE.S_Transcript_394122~~S_Transcript_394122.p1 ORF type:3prime_partial len:215 (-),score=42.38,NT-C2|PF10358.5|6.5e-17 S_Transcript_394122:2-643(-)
MFKLHKHKSGIKSRNKFDFKFSSFQANQVPKGWDKLFVSLVLLETGKTIGKLGRTSVRNGTCRWTETLSESVFIPQDNGNSKELETCIFKFVVAMGSSRSGILGEVSVNLADYMNSRTSTPLSLQLKKCNYSTTLQFKVQCLSEKRKHRDRQIKEADSDHDDVETKSDASDSAFSRSLGSTSSNHLESASASQAGFSRDSRDENKDYKLKIQTL

Click here to download the sequence:
Link to NCBI Protein BLAST