Transcript Information: S_Transcript_3942.p1


Annotated TAIR IDAT1G20760.1
Annotated Gene NameCalcium-binding EF hand family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:7209515-7214773 | Forward length=1019
E-Value5E-166
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.88845601893
Replicate 217.249563062066
Replicate 317.725035269026
Condition 2: 8 Hour
Replicate 120.897876596153
Replicate 218.810292547317
Replicate 319.355191811127
Condition 3: 24 Hour
Replicate 118.547542586354
Replicate 215.394287108462
Replicate 315.347376076698


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_3942.p1 GENE.S_Transcript_3942~~S_Transcript_3942.p1 ORF type:internal len:848 (+),score=197.75,EF-hand_4|PF12763.3|6.3e-12,EF-hand_1|PF00036.28|0.0044,EF-hand_1|PF00036.28|0.09 S_Transcript_3942:1-2541(+)
TCTACTCCTGGTCTTCCAAGCACCAGAATGTCGACTTCTGGTCTTCCAAACTCCAGTATTTCATCTGATTGGCTAGGTGGAAGGATGAGCGGGGCTCCATCTGGACCAACTTCTCAAGTCCCTAATAGGGGTGCTGCTCCTTCTCTACCTTCAGTTTCAGCAAAACCACAAGATCCAGCACTGATGGCTCAATCAGCAAATAAGGATTCTAAAGCACCTTCTGTTTCTGGAAATAGTTTCAGTTCCAACTCTGTTGCCGGAGGTGATCCTTTTGCTGCTTTTCAAACGATAATCAAACCTAGTGCTTCTTCAGCAACATCATCCACAACCACTATGCCAGTATCCTCAGCTATCGTTTCTGTTTCTGCTTCACCCACAGCAGCTTCAACTCCAACTTCTTCAGCCATTGTTCCCATATCTTCTGCAGCTCAGCCTCCCTCAGGGTCACGTTCACTTGATTCTTTGCAGAGTGCTTTTGTGAAGCAACCTGTGGGTGGCCAGCCACAGCTTGCACAAGCTTACTCGGGTCTCTCTCAACCTGTTCCTCAGGTCCCTTCTTCTGGTGTTTCGCCTGGCATTCCAGCGGGAGCTGGTAATTCTGTATCAGATCAATCCCAACCCCCATGGCCTAAGATGACAACTGCTGGCATACAGAAATATACCAAAGTGTTCATGGAAGTTGACACTGATAGAGATGGAAAAATCACTGGTGAGCAGGCACGGAATCTGTTTCTCAGCTGGAGACTGCCTAGAGAGGTTTTAAAGCAGGTGTGGGACTTGGCGGATCAGGATAGTGATAGCATGCTTTCACTGAGGGAGTTCTGTGTAGCCCTCTATTTGATGGAGTGTTATAGAGAAGGCCGTTCACTTCCATCTTCACTTCCAAATACCATAATGTTCGATGAAACTCTTATGCGTATGACAGGCCCCCCAAATTCATCTCATGGTAATGCATCATGGGTACCATCATCTGGAATGGGTTTTAGGCCAGTGCAGGGAATTTCTGCTTCTCAGGGAATGGCACCTGGAGCTGGTTTGAGGCCAGCCATGCAGTCAACTCCGCAGGCTGATGGGACAATGCAATTCCAACAACCAAAGTCGAGTCCGTTAACAATGGAAAATTCCCAACCAAGCCAACCCCGCGAAAGTGAGCAGAATTTGTTGCAGCCAAGTCCTTCAGAAATAAATAATACCGAGAAGAAGGTTGAAAAGGTGGAGAAGGTAATTCTTGATTCCAGGGAAAAGCTCGAGTTTTACCGTACAAAAATGCAGGAACTTGTTTTATACAAAAGCAGATGTGACAATCGATTAAACGAAATCATTGAAAGGGCATCTACAGATAAGCGTGAGGCGGAACAATTGGGCAAGAAATATGAAGAGAAATATAAGCAAGTTGCGGAACTAGCTTCAAAGTTAACTATTGAAGAGGCTAAATTCCGAGAATATCAGGAACGGAAAATGGAGTTGCAACAAGCAATCATAAACATGGAACAAGGAGGGAGTGCAGACGGTATTCTTCAGGTTCGTGCTGATAGAATACAGTCAGATCTTGAGGAGCTCCTGAAGGCTTTGTCTGAACGTTGCAAGAAACATGGACTAGAAATAAAGTCAGCTGCAGTGATTGAGCTTCCCAAAGGCTGGCAACCTGGAATTCAAGAGGGAGCTGCGGTATGGGATGAAGAATGGGACAAATTTGAAGATGATGGACTTGTTTTTGATAAAGAGATCAATGCTGATACCCAAAATACCAAGGCGTCTCCAAAATCTACATTATTCGAGAATGGAAGTTATCCTCATGATGACGCATTTAGTCCTGATTCCTCATCATACGGGGATGGAAAGTCAGAGAAACAATTTAGCAGAGGTGAACGTGTTCTTGATAGTGATTCTGGGTACGCCCATAGTGAAGATGAGTCTGTGAGAAGCCCTCATGACAGCCCAGCACATCGAGCCACACCGGAAACCCCATCTCAAGATTTCTCAGATGTATTTGCAAAGAGCTCTGAGGCAGATACAGACTTCCATCGAAGCTTTGATGACCAAGGTTGGGGCACTTTTGATGGTAATGATGATGTTGATTCAGTTTGGGGTTTCAATTCCAAAGACTTGGGTCACGAGCAGCATGGAGAAGACAGGTTGTTTGAATCGAGTGGCTTCGGGTTAAGCCCTAGAACCGAATCTGTACAAGGAGACAACACATACAACCAAAGGAGCCCGTTCAATTTTGCTGACTCTGTACCAGGAACGCCCTTTTCGAAGTCTGCCAACTCACCAAGATACAGTGAGGCTGGGGATGGCTTCTTTGACAATTACTCGAGGTTTGATTCTTTCAGCATGAGCGAAAGCAACCGTTTTTCACCCCCACGAGAAACCCTTGCCAGGTTCGACTCGATTAGCAGTAGCAGAGGTGGGTTTGGCCATAGTCGAGGATTCACTTCTTTTGATGACGCGGACCCCTTTGGGTCGTCTGGTCCGTTCAAGGTCTCGTCTGAAACACCAAAGGTTCAGATAATTGGAGTTCATTTTAGGCTCAATCTCAGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_3942.p1 GENE.S_Transcript_3942~~S_Transcript_3942.p1 ORF type:internal len:848 (+),score=197.75,EF-hand_4|PF12763.3|6.3e-12,EF-hand_1|PF00036.28|0.0044,EF-hand_1|PF00036.28|0.09 S_Transcript_3942:1-2541(+)
STPGLPSTRMSTSGLPNSSISSDWLGGRMSGAPSGPTSQVPNRGAAPSLPSVSAKPQDPALMAQSANKDSKAPSVSGNSFSSNSVAGGDPFAAFQTIIKPSASSATSSTTTMPVSSAIVSVSASPTAASTPTSSAIVPISSAAQPPSGSRSLDSLQSAFVKQPVGGQPQLAQAYSGLSQPVPQVPSSGVSPGIPAGAGNSVSDQSQPPWPKMTTAGIQKYTKVFMEVDTDRDGKITGEQARNLFLSWRLPREVLKQVWDLADQDSDSMLSLREFCVALYLMECYREGRSLPSSLPNTIMFDETLMRMTGPPNSSHGNASWVPSSGMGFRPVQGISASQGMAPGAGLRPAMQSTPQADGTMQFQQPKSSPLTMENSQPSQPRESEQNLLQPSPSEINNTEKKVEKVEKVILDSREKLEFYRTKMQELVLYKSRCDNRLNEIIERASTDKREAEQLGKKYEEKYKQVAELASKLTIEEAKFREYQERKMELQQAIINMEQGGSADGILQVRADRIQSDLEELLKALSERCKKHGLEIKSAAVIELPKGWQPGIQEGAAVWDEEWDKFEDDGLVFDKEINADTQNTKASPKSTLFENGSYPHDDAFSPDSSSYGDGKSEKQFSRGERVLDSDSGYAHSEDESVRSPHDSPAHRATPETPSQDFSDVFAKSSEADTDFHRSFDDQGWGTFDGNDDVDSVWGFNSKDLGHEQHGEDRLFESSGFGLSPRTESVQGDNTYNQRSPFNFADSVPGTPFSKSANSPRYSEAGDGFFDNYSRFDSFSMSESNRFSPPRETLARFDSISSSRGGFGHSRGFTSFDDADPFGSSGPFKVSSETPKVQIIGVHFRLNLS

Click here to download the sequence:
Link to NCBI Protein BLAST