Transcript Information: S_Transcript_394359.p1


Annotated TAIR IDAT2G38510.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16123985-16125445 | Forward length=486
E-Value4E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.14231551462663
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.11403952041248
Replicate 20.35890666266941
Replicate 30.11398848986621
Condition 3: 24 Hour
Replicate 10.46727023509292
Replicate 20.36359056004835
Replicate 30.13487724280811


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_394359.p1 GENE.S_Transcript_394359~~S_Transcript_394359.p1 ORF type:5prime_partial len:187 (-),score=20.20,MatE|PF01554.14|6.8e+03,MatE|PF01554.14|4.5e-24 S_Transcript_394359:36-596(-)
TCAGGATTGAATTCACTAAACATGATCATAGGCTTATTTGTTCATCTTTTGACATCAAATTCAACACTAAAGCCTTGGGATAAATCAGAAAATGAAACATCCTCACAGCCTCACGGATGGAAGCCACTGTTGGGGTCTGCAATCCCCAGTGTACTTTCAGTGTGTCTTGAGTGGTGGTGGTATGAGATTATGCTGCTAATATGTAGCAAGCTCAAAGATCCACAGATAACTACATCAGCCATGGGTATATTGATGCAGATAACAGGGCTGTTATATGTGTTCCCTCATTCATTAAGCTTAAGCATGTCTACTCTTGTTGGCAATGAACTTGGGGCAAACCAGTCTGCAAAAGCTCAAAGGACAACAGTAATAGGACTCGGGTTGGCCTTTGTGTTGGGATTACTGGCTTCAATGTTCGCATTTGTTGTCAAAAATGTTTGGGGAAACCTTTATACTAAGGAGCCAAAAATTCTTTCTATGACATCAGCAGTTCTTCCATGTCCATTTTCAATGGGGCCAAATAGTTTACTATATTTTTGGTCTTGGAATAATATGGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_394359.p1 GENE.S_Transcript_394359~~S_Transcript_394359.p1 ORF type:5prime_partial len:187 (-),score=20.20,MatE|PF01554.14|6.8e+03,MatE|PF01554.14|4.5e-24 S_Transcript_394359:36-596(-)
SGLNSLNMIIGLFVHLLTSNSTLKPWDKSENETSSQPHGWKPLLGSAIPSVLSVCLEWWWYEIMLLICSKLKDPQITTSAMGILMQITGLLYVFPHSLSLSMSTLVGNELGANQSAKAQRTTVIGLGLAFVLGLLASMFAFVVKNVWGNLYTKEPKILSMTSAVLPCPFSMGPNSLLYFWSWNNMD*

Click here to download the sequence:
Link to NCBI Protein BLAST