Transcript Information: S_Transcript_394371.p1


Annotated TAIR IDAT3G55480.2
Annotated Gene Nameprotein affected trafficking 2
Annotated Gene Symbol(s)PAT2
Annotation TypeHomolog
Chromosome Positionchr3:20566372-20571171 | Reverse length=1115
E-Value1E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.2309713959644
Replicate 23.4539191320071
Replicate 33.122891413517
Condition 2: 8 Hour
Replicate 14.9055210953149
Replicate 24.7173866141277
Replicate 34.699020718031
Condition 3: 24 Hour
Replicate 12.3729266411508
Replicate 22.8239254040816
Replicate 32.9815196261639


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_394371.p1 GENE.S_Transcript_394371~~S_Transcript_394371.p1 ORF type:internal len:313 (-),score=72.71,AP3B1_C|PF14796.2|1.8e-07 S_Transcript_394371:3-938(-)
CCTAAAGGCTCACTTTCTCCTGAACCTGTAAATCACCGTTTTTATCTGCCTGGATCTCTTTCACAAATAGTCCTTCATGCCGCTCCAGGCTATGAACCTCTTCCAAAACCCTGTAGTCTGCATTTCTCAGATATAGTTCAAGTAACAGAACTGTCTAAGGAATCTGATATAACAGACAATTCAGAGACACAGTCTGGTTCTCTGGATGCGGAAAGTGCATCAGATTATAGTTCTCAACATTCAGATAGTGGCTCAAGTTTTAGTGATGGCAGTAAGGATAGTGGATATGCAAGTGAAGCCGATGATAATGCTGATCCGTTGATCGAGATTTCTGATTCTAGGACCCCCTACAAGGGGCAAAATGGTGATGGTGGTGAGAGTAACTATTCACAATCTGAATCCAGTGGAGTGGAGAACATATTGTCCAAAAGAGCTTTAGAGTCATGGTTGGGTGAGCAGCCTGTTTCTTTAGACCTGAAGCCATCAGAACATGATCAAGCACAGAGATCTGCCCGAATCTTCATCAGTGATATTAGTAGTCGAGTCAAGCCTAAATCATACACCCTTCTGGATGCTGCAAGTGGACAGGGCTTAAAGATTGATTATTCATTTTCTTCTCAGATGTCAGATATTTCACCATTACTTGTCTGTGTTGAGGTTTTCTTGAAGAATTGCTCTAATGCATCTTTATCAAAAGTGATTTTGGTAGATGATGGATCGAACCGGGGTCCAGATTCTACAGAACAATCCTCGGTGACCACGGAGAGGTCATCTCATTCTCATGATACTGTGCCAACTCTGGTTCCAATGGAAGAGATTGATTCTCTTGAACCAAACCAGATGGTAAAAAGAATTCTCCATGTTCGATTTCACCATCATCTGCTGCCGTTGAAGTTATCCTTATGGTGTAGTGGCAAAAAGCAGGTTGTGAAATTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_394371.p1 GENE.S_Transcript_394371~~S_Transcript_394371.p1 ORF type:internal len:313 (-),score=72.71,AP3B1_C|PF14796.2|1.8e-07 S_Transcript_394371:3-938(-)
PKGSLSPEPVNHRFYLPGSLSQIVLHAAPGYEPLPKPCSLHFSDIVQVTELSKESDITDNSETQSGSLDAESASDYSSQHSDSGSSFSDGSKDSGYASEADDNADPLIEISDSRTPYKGQNGDGGESNYSQSESSGVENILSKRALESWLGEQPVSLDLKPSEHDQAQRSARIFISDISSRVKPKSYTLLDAASGQGLKIDYSFSSQMSDISPLLVCVEVFLKNCSNASLSKVILVDDGSNRGPDSTEQSSVTTERSSHSHDTVPTLVPMEEIDSLEPNQMVKRILHVRFHHHLLPLKLSLWCSGKKQVVKL

Click here to download the sequence:
Link to NCBI Protein BLAST