Transcript Information: S_Transcript_394376.p1


Annotated TAIR IDAT3G55480.2
Annotated Gene Nameprotein affected trafficking 2
Annotated Gene Symbol(s)PAT2
Annotation TypeHomolog
Chromosome Positionchr3:20566372-20571171 | Reverse length=1115
E-Value2E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.40630536236917
Replicate 20.33683648179412
Replicate 30.98548971439087
Condition 2: 8 Hour
Replicate 10.9767354343725
Replicate 21.1954422937258
Replicate 32.115313121105
Condition 3: 24 Hour
Replicate 11.0005290148364
Replicate 21.0380371714358
Replicate 31.5402775209231


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_394376.p1 GENE.S_Transcript_394376~~S_Transcript_394376.p1 ORF type:internal len:131 (-),score=25.56,Adaptin_N|PF01602.16|6.4e-12 S_Transcript_394376:1-390(-)
CGAGCAATAATTATATGGATGGTTGGAGAGTACAATTCTGCAGGGGAGAGAATTCCCTTAATGTTAACCTCTGTACTGAAGTATTTGGCTCATTGCTTTACGTCAGAAGAATCTGAAACAAAGCTCCAGATACTCAATACTGCTGCCCAGGCCTTTTTATGTGTCGAAGGAGCAGATCGATCAACTATTGAAAAAGTTGTCAACTTTGTGCTTGAGCTAGCAAAATGTGATGTGGCTTATGATGTCCGTGACCAAGCCCGTGCTTTAGCAAAGATATTGTCTACCCTTTTGTTTTCTCAAAATCATAATGTCAATGATAATTCATTCAGGACGGAGGCAGCACATGTTGTTGCAGAAAAAATATTTGGGCCCCCTAAAGGCTCACTTTCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_394376.p1 GENE.S_Transcript_394376~~S_Transcript_394376.p1 ORF type:internal len:131 (-),score=25.56,Adaptin_N|PF01602.16|6.4e-12 S_Transcript_394376:1-390(-)
RAIIIWMVGEYNSAGERIPLMLTSVLKYLAHCFTSEESETKLQILNTAAQAFLCVEGADRSTIEKVVNFVLELAKCDVAYDVRDQARALAKILSTLLFSQNHNVNDNSFRTEAAHVVAEKIFGPPKGSLS

Click here to download the sequence:
Link to NCBI Protein BLAST