Transcript Information: S_Transcript_394470.p1


Annotated TAIR IDAT1G53163.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15250.1); Has 315 Blast hits to 216 proteins in 74 species: Archae - 0; Bacteria - 86; Metazoa - 43; Fungi - 52; Plants - 27; Viruses - 1; Other Eukaryotes - 106 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:19812292-19813194 | Forward length=300
E-Value1E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.66950946503599
Replicate 20.416279048255
Replicate 30.57996025420128
Condition 2: 8 Hour
Replicate 10.20118292752012
Replicate 20.14070345056432
Replicate 30.26812386924505
Condition 3: 24 Hour
Replicate 10.13738920434336
Replicate 20.35634923862181
Replicate 30.31725842019014


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_394470.p1 GENE.S_Transcript_394470~~S_Transcript_394470.p1 ORF type:complete len:318 (+),score=37.04 S_Transcript_394470:22-954(+)
ATGGACACCCTACGAGATAAGCTTAATGATCACCACCACAACGATGACACCGCGACGTCGTCACCGTCGCCGGAGATGTTCTCATTCCCCGGCACCCCCGCCGAGGACGAAGGAGGGGAGTCCTCGTCCGAGTTCGAGTTTGGGTCGTGCGTCACCCCGGACTCCCCCGACGTCAACAACGTCACCAGCCGGAGCTCCTCCTCCCCGGCTGATCAATTCTTCCTCAACGGCCGCCTCCTCCCCCACGACTTCCCCGTCGCCTCATCCGGGCCCACCACCAGCAGCCGGTCCTCCTTCTCTGGCAAGGACAATCTCAGTCCCAACAACAAGACCAACAACATGAACAACACGTTGATCAACCTGTCAAGAGGAACAAGCGTGGGGAGCAGCATGAGCAAGGATTCTCTAATGTCATCGAGAAGCAACAGCACCAACAGCCGGGGGAGCACGTGCAGCACGTGCAGCAGTGCTAGGACTAGCTCAACCGAAGTTTCAGAAAGGCGCACGTTTCAGCAGAAACGCATCAAGGGTGCCAGTGTAAGAGATGATCATCAACACCAACAACAGCAGCAACAACAACAACACCAACAACGGAACGTCTCATCGACGACCACGTTGGGTCAGTATCAGTACTATCAATTTGGTGGGTCGTCAAGGAGGTGGCAGTTCATCACTCCTGCCCCCGTGTTGGGCCCCAGTCACTCCACACGAAGGGTGGGGCCCACCACGAGTCCCAGGAATAAGAAGAGAAGTCAAGAGAGAAAGAGAAGTGACGATCATAATAATAATAATAGTAATAGTAGTAATAATGAAGGGTTTTTGCAAAGGATGTTGAGATCTTTTGTGGCAACATGTAAGGCTTGCCATGCTATGGAGGAGGGTCATGAAAATGAGTTTGATGATCTGGATCATGGAGGTGTATTGGGGAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_394470.p1 GENE.S_Transcript_394470~~S_Transcript_394470.p1 ORF type:complete len:318 (+),score=37.04 S_Transcript_394470:22-954(+)
MDTLRDKLNDHHHNDDTATSSPSPEMFSFPGTPAEDEGGESSSEFEFGSCVTPDSPDVNNVTSRSSSSPADQFFLNGRLLPHDFPVASSGPTTSSRSSFSGKDNLSPNNKTNNMNNTLINLSRGTSVGSSMSKDSLMSSRSNSTNSRGSTCSTCSSARTSSTEVSERRTFQQKRIKGASVRDDHQHQQQQQQQQHQQRNVSSTTTLGQYQYYQFGGSSRRWQFITPAPVLGPSHSTRRVGPTTSPRNKKRSQERKRSDDHNNNNSNSSNNEGFLQRMLRSFVATCKACHAMEEGHENEFDDLDHGGVLGN*

Click here to download the sequence:
Link to NCBI Protein BLAST