Transcript Information: S_Transcript_3946.p1


Annotated TAIR IDAT1G21630.2
Annotated Gene NameCalcium-binding EF hand family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:7581457-7587796 | Forward length=1247
E-Value1E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.5053506028061
Replicate 25.9934349585375
Replicate 36.8252645348758
Condition 2: 8 Hour
Replicate 18.6476976482862
Replicate 28.2793455595839
Replicate 39.6508758841451
Condition 3: 24 Hour
Replicate 18.1703304393955
Replicate 26.1567047195589
Replicate 37.1495558943636


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_3946.p1 GENE.S_Transcript_3946~~S_Transcript_3946.p1 ORF type:complete len:254 (+),score=58.70,EF-hand_1|PF00036.28|0.0038,EF-hand_1|PF00036.28|0.22,EF-hand_7|PF13499.2|2.6e-05 S_Transcript_3946:151-912(+)
ATGGCGGCACAAAACCAAGGGGATCTGTTCGATGCGTATTTTAAGAGAGCGGATTTGGATCGTGATGGCAGGATTAGTGGCTCTGAAGCTGTTGCTTTCTTTCAGGGCTCCAATTTGCCCAAACAAGTTCTTGCTCAGATATGGACATATGCAGATCAGAATCGGGCTGGTTTCCTTGGCCGTCAGGAATTTTTTAATGCTCTGAAGCTCGTAACAGTGGCTCAGAGTAAGCGAGATCTAACACCTGAAATTGTCAAGGTCGCACTGTATGGAGCGGCTTCATCTAAGATCCCCCCTCCTCAAATAAATCTTCCACCATCGCCCATGACTCCGTCACCTTCTGTGGCTACTTCACCTGGAATGCAGATGGGTGCAATGACACCAGCAGCATCACAAAATCTTGCTTATAGAGGATCTGTACCTCCAAACTCGAACATGAATCAACAATATTTTCCTTCTCAAGCAAGTCAGTTTATCCGGCCTTCTCAAGGTTTTCCTGCTGGCTCTGTGCCCCATCCAACTCAAAGTGCTCCTGGTCTTCCAAATTCAGGCTTCTCAAGCACTGGGCTTCCTAACTCAAACATGTCAGTTCCTGGTCGAACAAGCTCAGGATTGTTGACTCCTGGTCTTCCAAGCTCCGGTATGACGACTCCTGGCTTTCCGACTCCTGGCCTTCCAAGCTCTGGCACCATGGCAATTCCTGGATTTCCAAGCTCTGGCATGTCGATGCCTCTCCTGGCCTTCCAAGCTCCGGCACCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_3946.p1 GENE.S_Transcript_3946~~S_Transcript_3946.p1 ORF type:complete len:254 (+),score=58.70,EF-hand_1|PF00036.28|0.0038,EF-hand_1|PF00036.28|0.22,EF-hand_7|PF13499.2|2.6e-05 S_Transcript_3946:151-912(+)
MAAQNQGDLFDAYFKRADLDRDGRISGSEAVAFFQGSNLPKQVLAQIWTYADQNRAGFLGRQEFFNALKLVTVAQSKRDLTPEIVKVALYGAASSKIPPPQINLPPSPMTPSPSVATSPGMQMGAMTPAASQNLAYRGSVPPNSNMNQQYFPSQASQFIRPSQGFPAGSVPHPTQSAPGLPNSGFSSTGLPNSNMSVPGRTSSGLLTPGLPSSGMTTPGFPTPGLPSSGTMAIPGFPSSGMSMPLLAFQAPAP*

Click here to download the sequence:
Link to NCBI Protein BLAST