Transcript Information: S_Transcript_3948.p1


Annotated TAIR IDAT1G21630.2
Annotated Gene NameCalcium-binding EF hand family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:7581457-7587796 | Forward length=1247
E-Value2.3E-265
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.822699492742
Replicate 216.208678862174
Replicate 316.664591807811
Condition 2: 8 Hour
Replicate 119.235332142625
Replicate 218.093566828145
Replicate 319.260694170557
Condition 3: 24 Hour
Replicate 116.918905779169
Replicate 214.898521554173
Replicate 314.470017507318


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_3948.p1 GENE.S_Transcript_3948~~S_Transcript_3948.p1 ORF type:complete len:1255 (+),score=347.97,EF-hand_4|PF12763.3|0.0021,EF-hand_4|PF12763.3|1.5e-10,EF-hand_1|PF00036.28|0.027,EF-hand_1|PF00036.28|0.35,EF-hand_1|PF00036.28|0.0034,EF-hand_1|PF00036.28|0.38,EF-hand_7|PF13499.2|1.3e-05,EF-hand_7|PF13499.2|0.0003,EF-hand_6|PF13405.2|0.27,EF-hand_6|PF13405.2|0.67,EF-hand_6|PF13405.2|0.12,EF-hand_6|PF13405.2|21,EF-hand_5|PF13202.2|0.0021,EF-hand_5|PF13202.2|81,EF-hand_5|PF13202.2|0.024,EF-hand_8|PF13833.2|3.4,EF-hand_8|PF13833.2|15,EF-hand_8|PF13833.2|3.2,EF-hand_8|PF13833.2|31 S_Transcript_3948:402-4166(+)
ATGGCGGCACAAAACCAAGGGGATCTGTTCGATGCGTATTTTAAGAGAGCGGATTTGGATCGTGATGGCAGGATTAGTGGCTCTGAAGCTGTTGCTTTCTTTCAGGGCTCCAATTTGCCCAAACAAGTTCTTGCTCAGATATGGACATATGCTGACCAAAATCGAACAGGCTACCTCGGGAGGACGGAGTTTTACAATGCTCTTAAGCTTGTGACTGTTGCACAGAGCAAAAGAGAACTTACTCCTGAGATTGTGAAGGCTGCTTTATATGGTCCAGCGTCAGCCAAAATACCAGCTCCGCAGATTAATGTGGCTAGTACACCAGTGTCTCAGCCAAGCACTGCAGGAATCCCTTCTCCATCTCAGGTTGGAACTGTTGCTCCAACAACGCAACAGAACCCTGGTTTCAGGGGCGTACCTGCATTGCCAACTTCTAACATGAATCAGCAGTACAACCAATCTCCAGTAAATGGTTTAGTGAGACCGCCAAATGCTGTTCCCGGTGTTGCTGCACGCCCAACACAAGGAGTTGGATTTCAAGGAGGGCCTTCTCTGGGTTCAAACCTGCCAAATTCTAGGGGATCAAGTGCTGGGGGAGAAGCAAATGCAGCTGTGACATCAACAACAATGTTTCCATCTGGAACACATGGACAGGTGGCTTCATTGCCCTCGAAACCGCAGATGGCGTCTGGAGTGAACTCATCAGCAACTCCTGTCATGCAGCGAAAACCACTAGTTTCACAAAATGGGTTCGCCTCAGGCCCTCTTTTTGGAGGTGATGCATTCTCTGCAACTCAGACCAGAAAAGATGTTCCAGTGCCAACATCCGCTGGTAGTGTACCGGTCTCATCTGGTTTGCTTCCTGTTTCTGGAGGCAACCATTCTTCCTCTAAGCAGAGCCCCCTTGGTTCGGCACCAAATTCATTTACGCCTCAACCTGTTGGTGGACAGCTTCAAAAGACACAATCTATTCCGAAACAGAATCAACAAGCAGCAGTCCCAAGTTTGCCTCCATCTGGTCCGCGTGCAGTTTCTCCTCATGTTTCTGCTGGACAACAGCCCCAGCTGCAATGGCCAAGACCTAGTCCTACTGATCTGCAAAAATATGCTAAAGTGTTTATGGAAGTAGATACCGATAAAGACGGTAAAATATCTGGTGAACAGGCACGGAACCTCTTCCTAAGTTGGCGACTACCCAGAGAGGTCTTAAAGCAGGTGTGGGACTTGTCTGATCAGGATAATGATAGCATGCTTTCTCTCAGGGAATTTTGTATTGCACTTTATCTCATGGAAAGGTACAGGGAAGGACGTCCCCTCCCAGCAGTGCTCCCAAGTAACGTCATGCTTGATTTTCCTGCCCCTGTTCATCAAACAGGCGGATATGGTAATGCTGCCTGGGGATATGCACCTGGTTCGCAACCACAAGCCATGCTTGGTGCTGGTGCTCGGCCGCCACGTCCAGCTGGAAAGCCACCACTGCCTGTTCCTGCTCCATCTGATGATAGATTGCCGCCTAAACCACAGAAGGCCAAAGTGCCTGTGTTAGAGAAACACCTAGTGGACCAGCTGAGTGAGGAGGAGCAGAAATATCTGAATTTGAAGTTCCAGGAGGCTACAGAGGCAAATAAAAAAGTTGAAGAACTGGAGAAGGAAATTAAAGAATCAAAAGAGAAAATGGAGTTTTATCGAGTTAAGATGCAAGAGCTTGTTCTGTACAAGAGTCGATGTGACAGCCGCTATAATGAAGTTTCAGAAAGGGCTTCTGCAGATAAACGTGAGGTTGAGTCTCTGGCGAATAAGTATGAAGAGAAATACAGACAGAGTGGGAATGTGGCGTCTAAGTTGACAATTGAAGAAGCTACATTCCGTGACATACAGGAGAGGAAAATGGAGATGTACCAAGCAATTGTGAAGATGGAGCACGAAGGTGGTGGTGAGGATTCTCAGGTTCGTGCTGATAACATCAAGTCTAGTCTGGAGGAGTTAGTGAAATCTCTCAGTGAGCGTTGCAAGAAGTATGGCCTGCGTGCAAAGCCAACTACTATACTTGAGCTTCCTTTTGGATGGCAACCTGGTATTCAGGAGAGTGCTGCTGATTGGGATGAAGATTGGGATAAATTTGAAGATGAAGGCTTTGCTTTTGTGAAGGAACTCACTCTTGACGTACAGAATGTCATTGCTCCTCCAAGAACAAAGGTTAAACCTGCAAAGAAAGAAAAGAATGACACTGGTGAAAATGAAGCAACCATGCCTACATCAGATGCTGAATCCAAACAAGTCAAGCCCTCTACTGAGGATGAAAGGGTGGCAGAAAATGGTGTAGCAGGTGACCATAAAGAAAATGACTTTTCAAAAAGTCCTGTTGCTAGTCCTTCTGCAAGAAATTCACATGAAAGTCCCCGTGATGGATCTAAGGATACTTTTGAAAAGACTGGCACTTCAGATGTTTCACCTCAATCCAAGAGAAGTCAGAGTGATTTTGTGGTTTCTGGGGACAAGAGTGTTGATGAGCCAGCATGGGGCACGTTTGATACAAGTGATGACGTTGATTCAGTATGGGATTCCTCCAAGGAAAGGGATCATGACAAACATACTGATGACTTGTTTGGACATGGGGGGTGGACTCTTCCTCCCATTAAGACCGGATCTGGATATGAGGAATGGACTCTTCCACCTATTAAAACTGGATCTGGACATGAGGAGTGGACTCTTCCCCCTATTAAGACTGCATCTCCAGCAGGCTTGCCTAAATCAAGCATATTTGCAGATTCTGTTCCTGGTACACCAGCTGATGGGTTTATGCCAAAGAAGAGTATATTTGCAGACTCTGTTCCTGGCACCCCAGCTGAAGGGTTTTTCCCAAAAAAGAACATCTTTGCAGATTCTGTCCCAAGCACACCGCTTCATGGTTCAAGCTACTCTCCTCAGAAGTCTGGTGAAGGGCCAGAAGAACGTGGTTTCAACTTTTCGAGGTTTGACTCTTTCAAATCTACGGACAGTGGATTCCATCCACAGGAGAGGTTTTCTCGATTTGATTCTATGCGTAGTACTGGAGACTTTGACTCACACGATGAAGCGTCGTTCCAGCCAAGGGAACTGTCACGGTTTGACTCCATGCGAAGTACTAAAGATTTTGACTATGATTCTCGGTTTTCATCATTTGATGATTCAGACCCTTTTGGCTCTGGACCATTTAAGTCATCATTTGCTGAAACTCCGAGGAGAGACTCTGATGCTTTTGGGTCTAGCGAAACATTCAGGTATTCTCTAGGAAGTGAAACACCACGGTCAGAGGTAGACCCCTTTGGTTCTGTTGGACCGTTCAGGTCATCACTGGCCAGTGAAACTCCCAGGGGAGATTCAGATCCTTTTGGTGGGCCTTTCAGGTCATCTATGGGCAGTGAAACTCCCAGGACAGATTCAGATCCTTTCGGTGGGCCTTTCAGGTCATCTCTAGGCAGTGAAACTCCGAGATCAGAGGTAGACCCCTTTGGGTCTGTTGGACCTTTCAGTTCATCATTCGGTGGTGAAACCCCTAGGCGAGAGTCAGACTATTTTGCTTATTCTGGTTCATTCAAGTCGTCTTTTGGAAATGAGACTGCGAGGGTAGAGTACGACTCTTTTGGGTATGGTGGCCCATTTAAGTCATCTGTAGGTAGTGAAACACCAAGGCGAGACTCAGATGCGTTCGGGTCTACCGGCCCGTTCAAGTCCTCTTTCAGTGAAACCCCAAGAGGAGGTACAGACGGTTGGAGTGCATTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_3948.p1 GENE.S_Transcript_3948~~S_Transcript_3948.p1 ORF type:complete len:1255 (+),score=347.97,EF-hand_4|PF12763.3|0.0021,EF-hand_4|PF12763.3|1.5e-10,EF-hand_1|PF00036.28|0.027,EF-hand_1|PF00036.28|0.35,EF-hand_1|PF00036.28|0.0034,EF-hand_1|PF00036.28|0.38,EF-hand_7|PF13499.2|1.3e-05,EF-hand_7|PF13499.2|0.0003,EF-hand_6|PF13405.2|0.27,EF-hand_6|PF13405.2|0.67,EF-hand_6|PF13405.2|0.12,EF-hand_6|PF13405.2|21,EF-hand_5|PF13202.2|0.0021,EF-hand_5|PF13202.2|81,EF-hand_5|PF13202.2|0.024,EF-hand_8|PF13833.2|3.4,EF-hand_8|PF13833.2|15,EF-hand_8|PF13833.2|3.2,EF-hand_8|PF13833.2|31 S_Transcript_3948:402-4166(+)
MAAQNQGDLFDAYFKRADLDRDGRISGSEAVAFFQGSNLPKQVLAQIWTYADQNRTGYLGRTEFYNALKLVTVAQSKRELTPEIVKAALYGPASAKIPAPQINVASTPVSQPSTAGIPSPSQVGTVAPTTQQNPGFRGVPALPTSNMNQQYNQSPVNGLVRPPNAVPGVAARPTQGVGFQGGPSLGSNLPNSRGSSAGGEANAAVTSTTMFPSGTHGQVASLPSKPQMASGVNSSATPVMQRKPLVSQNGFASGPLFGGDAFSATQTRKDVPVPTSAGSVPVSSGLLPVSGGNHSSSKQSPLGSAPNSFTPQPVGGQLQKTQSIPKQNQQAAVPSLPPSGPRAVSPHVSAGQQPQLQWPRPSPTDLQKYAKVFMEVDTDKDGKISGEQARNLFLSWRLPREVLKQVWDLSDQDNDSMLSLREFCIALYLMERYREGRPLPAVLPSNVMLDFPAPVHQTGGYGNAAWGYAPGSQPQAMLGAGARPPRPAGKPPLPVPAPSDDRLPPKPQKAKVPVLEKHLVDQLSEEEQKYLNLKFQEATEANKKVEELEKEIKESKEKMEFYRVKMQELVLYKSRCDSRYNEVSERASADKREVESLANKYEEKYRQSGNVASKLTIEEATFRDIQERKMEMYQAIVKMEHEGGGEDSQVRADNIKSSLEELVKSLSERCKKYGLRAKPTTILELPFGWQPGIQESAADWDEDWDKFEDEGFAFVKELTLDVQNVIAPPRTKVKPAKKEKNDTGENEATMPTSDAESKQVKPSTEDERVAENGVAGDHKENDFSKSPVASPSARNSHESPRDGSKDTFEKTGTSDVSPQSKRSQSDFVVSGDKSVDEPAWGTFDTSDDVDSVWDSSKERDHDKHTDDLFGHGGWTLPPIKTGSGYEEWTLPPIKTGSGHEEWTLPPIKTASPAGLPKSSIFADSVPGTPADGFMPKKSIFADSVPGTPAEGFFPKKNIFADSVPSTPLHGSSYSPQKSGEGPEERGFNFSRFDSFKSTDSGFHPQERFSRFDSMRSTGDFDSHDEASFQPRELSRFDSMRSTKDFDYDSRFSSFDDSDPFGSGPFKSSFAETPRRDSDAFGSSETFRYSLGSETPRSEVDPFGSVGPFRSSLASETPRGDSDPFGGPFRSSMGSETPRTDSDPFGGPFRSSLGSETPRSEVDPFGSVGPFSSSFGGETPRRESDYFAYSGSFKSSFGNETARVEYDSFGYGGPFKSSVGSETPRRDSDAFGSTGPFKSSFSETPRGGTDGWSAF*

Click here to download the sequence:
Link to NCBI Protein BLAST