Transcript Information: S_Transcript_39480.p1


Annotated TAIR IDAT3G23550.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8448435-8450649 | Reverse length=469
E-Value2E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3420978295343
Replicate 23.3863816530139
Replicate 33.0880860419052
Condition 2: 8 Hour
Replicate 10.39675144776061
Replicate 20.52027554976108
Replicate 30.99143477232471
Condition 3: 24 Hour
Replicate 14.572184916636
Replicate 23.0569792358794
Replicate 33.9886023710416


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39480.p1 GENE.S_Transcript_39480~~S_Transcript_39480.p1 ORF type:complete len:215 (+),score=14.76,MatE|PF01554.14|2e-11,MatE|PF01554.14|2.3e+03,MatE|PF01554.14|2.3e+03 S_Transcript_39480:3113-3757(+)
ATGTGGGCAAGCATTTGGAGCAAGATGTTACAAAATGTTGGGTGTTCATCTCCAATCAGCTTGCATAATACATTTTTGTTTTCCATCATCATATCCATAATATGGTGGTACACTGAACCAATTCTCATATTTCTTCACCAAAACCCTGATGTTTCAAAACAAACTGCTATCTTTTTGAGACATCTAATTCCTGGTATATTTGCATTTGGTACCATCCAAAATATACTAAGGTTTCTTCAAACACAGTCCGTGGTTTATCCCCTAGTTATTTGCTCATTGGTGCCATTGCTATTGCATCTTGGACTTACTTATGTGTTAGTTCATTTCACCCCCCTTGGATTCAGAGGCGCTGCTTTGTCCACTTCAATTGCATTTTGGATATCGGCTCTTATGCTCATAGGTTATATGAATTATGGTGACAAGTTTAAGCAAACTTGGAGAGGATTATCCAAGGATTCGTTGAATTATGTCTTGGCCAATTTGAAATTGGGTTTGCCTTCTGCTGCTATGGTCTGGTTAGTAGTACTCCTCCATAAGTTAATGACTTCATTGACGCCATTTTACTCCGTCTGTCCCAAAATGATGTTCTTGTTTTATTATCTGGTTAAACCTAAAACATTGTTTGTGTTTCTTGTTCTTTCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39480.p1 GENE.S_Transcript_39480~~S_Transcript_39480.p1 ORF type:complete len:215 (+),score=14.76,MatE|PF01554.14|2e-11,MatE|PF01554.14|2.3e+03,MatE|PF01554.14|2.3e+03 S_Transcript_39480:3113-3757(+)
MWASIWSKMLQNVGCSSPISLHNTFLFSIIISIIWWYTEPILIFLHQNPDVSKQTAIFLRHLIPGIFAFGTIQNILRFLQTQSVVYPLVICSLVPLLLHLGLTYVLVHFTPLGFRGAALSTSIAFWISALMLIGYMNYGDKFKQTWRGLSKDSLNYVLANLKLGLPSAAMVWLVVLLHKLMTSLTPFYSVCPKMMFLFYYLVKPKTLFVFLVLS*

Click here to download the sequence:
Link to NCBI Protein BLAST