Transcript Information: S_Transcript_39488.p1


Annotated TAIR IDAT5G46850.2
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: endoplasmic reticulum membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PIG-X/PBN1 (InterPro:IPR013233).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19010714-19012010 | Forward length=325
E-Value7E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.7731907441397
Replicate 26.4203884955731
Replicate 33.9032245679578
Condition 2: 8 Hour
Replicate 15.8673031560366
Replicate 28.6409785751325
Replicate 35.3007663356303
Condition 3: 24 Hour
Replicate 14.3920929769449
Replicate 24.4368308376976
Replicate 35.471448786295


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39488.p1 GENE.S_Transcript_39488~~S_Transcript_39488.p1 ORF type:complete len:189 (+),score=34.84,PIG-X|PF08320.8|7.1e-20 S_Transcript_39488:507-1073(+)
ATGCCTGCCTCTTCCTCACAGGTGTGTGAGGTCATAATTATTGAAAGACTACCATCTGGAGTTTTTGCAGACCCTTTTGAGTTAAATCATCTTCTTCAACGCAAAGTATTCAATGATGCTTATGTTTTTGGTGATGTAAATTTGGAATTGCCTTCATTCCGTTCCAATCGGTCTATTGTTGAAGTTCACGTAGATTCTACAGTGATCAAGCCATCAGGGCAGGAGATTGTACAAGAGTTCAAGATAGAGATGCCATTGCATACACGATACCCTCCCCTGGAAGACAGTGGATATTCGAAAGTGAGATTTGGCATTCCTGACTTGTTAATACGCTGCAAGATTCATGAAGAGCTGCCTGCTTCAAGCTGTTTGTTAACATCTATTGCTAGTAGTGGCAGTCTGCAACTTGATGATGTTGTATGGAGCATACCAGCTTGTGTCAAGGCCCATGCAGGAATTGTATCTGTTGTTTCTCTTACATCAGCCTTATTATCGGCAATTTCGATTATCATTGCTGCATTCCACCAGTCATCAATGCAGTCTGTCGAAAGGTTGAAACAGCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39488.p1 GENE.S_Transcript_39488~~S_Transcript_39488.p1 ORF type:complete len:189 (+),score=34.84,PIG-X|PF08320.8|7.1e-20 S_Transcript_39488:507-1073(+)
MPASSSQVCEVIIIERLPSGVFADPFELNHLLQRKVFNDAYVFGDVNLELPSFRSNRSIVEVHVDSTVIKPSGQEIVQEFKIEMPLHTRYPPLEDSGYSKVRFGIPDLLIRCKIHEELPASSCLLTSIASSGSLQLDDVVWSIPACVKAHAGIVSVVSLTSALLSAISIIIAAFHQSSMQSVERLKQP*

Click here to download the sequence:
Link to NCBI Protein BLAST