Transcript Information: S_Transcript_394951.p1


Annotated TAIR IDAT4G20325.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Ribonuclease H2, subunit B (InterPro:IPR019024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:10980124-10982426 | Forward length=277
E-Value2.4E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1385447421127
Replicate 26.1066649668121
Replicate 33.4580130156751
Condition 2: 8 Hour
Replicate 15.7121581206606
Replicate 28.3894432398975
Replicate 35.8999221049502
Condition 3: 24 Hour
Replicate 13.1206976415135
Replicate 23.6423982890558
Replicate 33.1527555506395


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_394951.p1 GENE.S_Transcript_394951~~S_Transcript_394951.p1 ORF type:complete len:112 (-),score=10.71,RNase_H2-Ydr279|PF09468.6|4e-16 S_Transcript_394951:207-542(-)
ATGGCGGCTTGGTGGGAAAGTGCTGATGGTCATATTCGAGTTCTTATTGCCCCAGACCAAGGCACTCTATCCGACAATACTGGAGAATTGCTTTCATTATGCCATCCCAAATCTGGAGTTACAACCAATTTTCTCTTCATCAATGAGGGTCTTCAAGAACTGAATTGGTTTAAACAATCTCATAGTTCATGGTTTCTGGGGGACTATATATGTGAAGATGGAAGCTTATATACATCAACACCAGTCGATCCTGTCTTTATTCTACTACCAATATTTCAGGATGCTCGGATGAAGGTAGATGAAAATTTTTATTTGTATTTCTGTCTAATTCTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_394951.p1 GENE.S_Transcript_394951~~S_Transcript_394951.p1 ORF type:complete len:112 (-),score=10.71,RNase_H2-Ydr279|PF09468.6|4e-16 S_Transcript_394951:207-542(-)
MAAWWESADGHIRVLIAPDQGTLSDNTGELLSLCHPKSGVTTNFLFINEGLQELNWFKQSHSSWFLGDYICEDGSLYTSTPVDPVFILLPIFQDARMKVDENFYLYFCLIL*

Click here to download the sequence:
Link to NCBI Protein BLAST