Transcript Information: S_Transcript_394954.p1


Annotated TAIR IDAT4G20325.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Ribonuclease H2, subunit B (InterPro:IPR019024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:10980124-10982426 | Forward length=277
E-Value4E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.5703938994928
Condition 2: 8 Hour
Replicate 10.21984938471271
Replicate 20.69191284452763
Replicate 30.43950201247384
Condition 3: 24 Hour
Replicate 10.22520498443911
Replicate 20
Replicate 31.0400843053656


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_394954.p1 GENE.S_Transcript_394954~~S_Transcript_394954.p1 ORF type:3prime_partial len:97 (+),score=8.90 S_Transcript_394954:446-733(+)
ATGTCAGGTTTATTTGATGTCTTTATTGTTCTGTATACATGGATAATGACAACATCCTTGAAAGGGATACAGCGAAGGTTGAAGAGAAGACCTTACTTTCCCCATTTAATTGTGCTTAATCACATGTTTGGTATCTTATTGAGTTGGTTTCAAACTTTCCACTTCAAATTGTTACAAAACAATGTTTTCAATGATTCATCTGCAGGAGTTACAACCAATTTTCTCTTCATCAATGAGGGTCTTCAAGAACTGAATTGGTTTAAACAATCTCATAGTTCATGGTTTCTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_394954.p1 GENE.S_Transcript_394954~~S_Transcript_394954.p1 ORF type:3prime_partial len:97 (+),score=8.90 S_Transcript_394954:446-733(+)
MSGLFDVFIVLYTWIMTTSLKGIQRRLKRRPYFPHLIVLNHMFGILLSWFQTFHFKLLQNNVFNDSSAGVTTNFLFINEGLQELNWFKQSHSSWFL

Click here to download the sequence:
Link to NCBI Protein BLAST