Transcript Information: S_Transcript_395004.p1


Annotated TAIR IDAT1G56440.2
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)TPR5
Annotation TypeHomolog
Chromosome Positionchr1:21138765-21141482 | Reverse length=494
E-Value6E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.26613001235181
Replicate 20.36771315929191
Replicate 30.18442736083601
Condition 2: 8 Hour
Replicate 10.4975924407331
Replicate 20.59658263039271
Replicate 30.5684226027995
Condition 3: 24 Hour
Replicate 10.072816278301981
Replicate 20.15109207717565
Replicate 30.084073481350387


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_395004.p1 GENE.S_Transcript_395004~~S_Transcript_395004.p1 ORF type:complete len:300 (+),score=73.85,TPR_11|PF13414.2|5.2e-14,TPR_11|PF13414.2|3.9e-07,TPR_1|PF00515.24|0.00089,TPR_1|PF00515.24|4.6e-07,TPR_1|PF00515.24|0.035,TPR_2|PF07719.13|0.024,TPR_2|PF07719.13|0.00014,TPR_2|PF07719.13|0.04,TPR_12|PF13424.2|0.26,TPR_12|PF13424.2|2e-06,TPR_10|PF13374.2|0.35,TPR_10|PF13374.2|0.0013,TPR_10|PF13374.2|9.6e+02 S_Transcript_395004:75-902(+)
ATGGATACATTTTCTTCTCTCCCTATTGTGGCAGCTGTTCCAGTTTCTTCTCTCCCTCCAGAAAATCAAAATGAAGAAATTCATGTCGTCCCAGAAGAAAAAAGGACAAAAAAACTTAGTGACTCAGAGAGACAGAGAATTGTTGACATTGTTCTTCTCAATTCAAAGAGGAAATCATTTGGAGAAATTAAAGCTGAAAGAGGCATAATGAAGAAATTAGCATTGGAATTCAAGGTCTCGACTCATACAGTGAGCAACATATGGAGAAAAGCAAAGCAGCAAATGCAAGACGGGGTTGCCATAGATGTAAAGAATCGAATGCCAGGGAATGTAGGGAGAAAAAGGATTCAGATGGACTTTGGTAAAATTGAAGATATCCCGCCTCACAAAAGAACTAGTATTAGAGCATTGGCAAGTGCAATGAATATGCCCTCGTCGACACTCTATCGAGCCATGAAAAGAGCTGCAACCTCAGAAAAAGACATTGGCAATGACTATTACAAGCAAAAGAAATTCGAGGAAGCAATTCTATGGTACTCAAATAGCCTCACCCGCTCAAGAACAGCTGTAGCATATGCAAATAGAGCGGCTGCTTATCTCAAAGTCGGTAGATACTCGGAAGCTGAGAGTGACTGTACTGAGGCCTTGAACATTGATAAACACTACCTGAAACCGTATGCACGCAGAGCAATGGCCAGGAAAGAACTTGGAAAGCTTCAGGATGCAAAGGAAGATGCAGAGCTTGGCTTGAAGTTGGAACCAGAGCACCATGAAATCTTGAAACTGTATGTGGAGATCAACTCTTTGCTTGAAAAGGAAACTGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_395004.p1 GENE.S_Transcript_395004~~S_Transcript_395004.p1 ORF type:complete len:300 (+),score=73.85,TPR_11|PF13414.2|5.2e-14,TPR_11|PF13414.2|3.9e-07,TPR_1|PF00515.24|0.00089,TPR_1|PF00515.24|4.6e-07,TPR_1|PF00515.24|0.035,TPR_2|PF07719.13|0.024,TPR_2|PF07719.13|0.00014,TPR_2|PF07719.13|0.04,TPR_12|PF13424.2|0.26,TPR_12|PF13424.2|2e-06,TPR_10|PF13374.2|0.35,TPR_10|PF13374.2|0.0013,TPR_10|PF13374.2|9.6e+02 S_Transcript_395004:75-902(+)
MDTFSSLPIVAAVPVSSLPPENQNEEIHVVPEEKRTKKLSDSERQRIVDIVLLNSKRKSFGEIKAERGIMKKLALEFKVSTHTVSNIWRKAKQQMQDGVAIDVKNRMPGNVGRKRIQMDFGKIEDIPPHKRTSIRALASAMNMPSSTLYRAMKRAATSEKDIGNDYYKQKKFEEAILWYSNSLTRSRTAVAYANRAAAYLKVGRYSEAESDCTEALNIDKHYLKPYARRAMARKELGKLQDAKEDAELGLKLEPEHHEILKLYVEINSLLEKETV*

Click here to download the sequence:
Link to NCBI Protein BLAST