Transcript Information: S_Transcript_395279.p1


Annotated TAIR IDAT3G51700.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19179443-19181145 | Reverse length=344
E-Value6E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.22150345187848
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.22439417402324
Replicate 30.24972321193184


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_395279.p1 GENE.S_Transcript_395279~~S_Transcript_395279.p1 ORF type:5prime_partial len:101 (+),score=9.54,Herpes_Helicase|PF02689.10|2.2e-06,UvrD_C_2|PF13538.2|9.6e-06 S_Transcript_395279:2-304(+)
TCTCTCAGACCATCTACTTCTGTGACGTATCCATTCAAATTTGAGAGACGACAGTTTCCAATTAAACTTTGCTTTGCAATGACAATAAATAAATCCCAAGGGCAAACATTGACAGATGTTGCTTTGTATCTGCGCAAGCAATGCTTCTCACATGGACAGCTCTATGTTGCCCTATCAAGAGCTAAAAAAGCAAGCAGTGTAAAATTATTTGTACAGTCGAATGACAAAGTGGAACGACAATCAACAACACTGACGAATATTGTCTCATTTGATCTGCTTAAAAGAGCTGGCATACTGTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_395279.p1 GENE.S_Transcript_395279~~S_Transcript_395279.p1 ORF type:5prime_partial len:101 (+),score=9.54,Herpes_Helicase|PF02689.10|2.2e-06,UvrD_C_2|PF13538.2|9.6e-06 S_Transcript_395279:2-304(+)
SLRPSTSVTYPFKFERRQFPIKLCFAMTINKSQGQTLTDVALYLRKQCFSHGQLYVALSRAKKASSVKLFVQSNDKVERQSTTLTNIVSFDLLKRAGILS*

Click here to download the sequence:
Link to NCBI Protein BLAST