Transcript Information: S_Transcript_3954.p1


Annotated TAIR IDAT2G26500.2
Annotated Gene Namecytochrome b6f complex subunit (petM), putative
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:11270370-11270747 | Forward length=125
E-Value2.6E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1257.10060121844
Replicate 2226.93154973444
Replicate 3259.02164160271
Condition 2: 8 Hour
Replicate 1218.29964284458
Replicate 2249.48606206267
Replicate 3234.37916362084
Condition 3: 24 Hour
Replicate 1225.76297000324
Replicate 2270.14453977164
Replicate 3273.16374878041


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_3954.p1 GENE.S_Transcript_3954~~S_Transcript_3954.p1 ORF type:5prime_partial len:224 (+),score=25.29,PetM|PF08041.7|8.2e-11 S_Transcript_3954:2-673(+)
TTGAAATGTAGGGGTATTACAATTACTATTACTATTATTATTGCTGCGGCAGCAGCAGCAGCAGCATATGGATACTGTTATCCGTCACTACTAAGCGTATACACGTATCTCATGTTATTGTTTTCCAGCCAACCAAATTCCATCTCACCTTATCCAAACCCGACCAACATCACACTTTCACTACATAGCCCATTAACCCGTTCCCTCCCTTTTCTTTCCAAAGCCACTCAATTAATATTCACTTCGACTATTGTTCATTCCTTTGCCATCTCATCTCTAGGACAGGACCTCCAAATGGCAACTACAACCCTGTCGTCAACAACGGTTCCAGCAACCGTTACAATCACAGGCAACAAGGCCGGGCTGAGGCCGAGCAAGGTGGTTTACTTGAACGGGCTCAACTCCTACGGCGGGCTAAAGGCTCAAAACACGGTGCTCGGACTCGGCCTCCCGGTTTCCACTGAGCAGTGCTTTGCCAATGTTGTGAGCTCATTGAGGTCTGGGGCTGGCAAGAAGGGAAGATCAGGTGGTGGTGGTGCTCTGTCTTCTACCTGCAATGCTGCATCTGAGATCTTCAGGATTGCTGCTATCATGAATGGACTTGTCCTTGTGGGTGTTGCTGTTGGTTTTGTCCTCCTTCGGATTGAAGCATCAATTGAGGAAGCTGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_3954.p1 GENE.S_Transcript_3954~~S_Transcript_3954.p1 ORF type:5prime_partial len:224 (+),score=25.29,PetM|PF08041.7|8.2e-11 S_Transcript_3954:2-673(+)
LKCRGITITITIIIAAAAAAAAYGYCYPSLLSVYTYLMLLFSSQPNSISPYPNPTNITLSLHSPLTRSLPFLSKATQLIFTSTIVHSFAISSLGQDLQMATTTLSSTTVPATVTITGNKAGLRPSKVVYLNGLNSYGGLKAQNTVLGLGLPVSTEQCFANVVSSLRSGAGKKGRSGGGGALSSTCNAASEIFRIAAIMNGLVLVGVAVGFVLLRIEASIEEAE*

Click here to download the sequence:
Link to NCBI Protein BLAST