Transcript Information: S_Transcript_39546.p1


Annotated TAIR IDAT1G40087.1
Annotated Gene NamePlant transposase (Ptta/En/Spm family)
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:14999762-15001868 | Reverse length=390
E-Value6E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.70653985580125
Replicate 20.6833607385071
Replicate 31.0608653499416
Condition 2: 8 Hour
Replicate 11.7928425487855
Replicate 21.6828381720148
Replicate 31.5090865561049
Condition 3: 24 Hour
Replicate 11.739857977127
Replicate 21.2033882252928
Replicate 30.44640786557728


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39546.p1 GENE.S_Transcript_39546~~S_Transcript_39546.p1 ORF type:complete len:226 (+),score=24.97 S_Transcript_39546:914-1591(+)
ATGGAAAACCAAAGAGCTGGTGGATATAATATCACAAACAAAAGACGACTTCGAGGAATGAAAGAAAGGAATGAAAAAGGTCGTGGATGCAATAGAGTAAAGGCTTTGACCCAATGTGAGTTTGTAGATGTCAATGAAAAGCTTCAACCAATAGGTGAATCTGCGAGGAGGCTATCTTCACACATAGGATGTCTAGTACGGGACCCAAGACGATTGCCTCTTGATTGTACAGATTGGAGAAAGATAGAAAAGCAAAAGTTGGAAGATGTGTGGAATGAAGTCAAGCGTTCATATTTTTTCCCCGAAGGGCTGGAGCCTTATGATTGGGGAATGTTGAAAATGAATGCTTGTTGGAGAGGATATAAGTCAGATCTTAAAGTGGCTCTTTTTTATGGAAAAACCCTTGATGATGCAATTAAGGCAAAGCCAAAGCAAATACCAGATGAGACTTGGATGAATATGGTGAATTTTTGGAAGTCAGATTTGAGTCAAGTAAGATACACGTTTTTACATTATGTGTCTAGATGTTTTTATGATATTCTAATCAATATTATTTTTTATTTTATTCAAGGACTAAAAGGGGAATTGAAAATCGAGCAAACTCAAAAATGTGTCACTATGCTGGAACGAAGAGCTTCACATGTGTGCGTGCTGAAAAAAGGGTATAGAAGAAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39546.p1 GENE.S_Transcript_39546~~S_Transcript_39546.p1 ORF type:complete len:226 (+),score=24.97 S_Transcript_39546:914-1591(+)
MENQRAGGYNITNKRRLRGMKERNEKGRGCNRVKALTQCEFVDVNEKLQPIGESARRLSSHIGCLVRDPRRLPLDCTDWRKIEKQKLEDVWNEVKRSYFFPEGLEPYDWGMLKMNACWRGYKSDLKVALFYGKTLDDAIKAKPKQIPDETWMNMVNFWKSDLSQVRYTFLHYVSRCFYDILINIIFYFIQGLKGELKIEQTQKCVTMLERRASHVCVLKKGYRRR*

Click here to download the sequence:
Link to NCBI Protein BLAST