Transcript Information: S_Transcript_395605.p1


Annotated TAIR IDAT2G13770.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); Has 451 Blast hits to 352 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 8; Plants - 388; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:5736603-5737847 | Forward length=343
E-Value2.7E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.24514210619461
Replicate 30
Condition 2: 8 Hour
Replicate 10.47389756260296
Replicate 20
Replicate 30.94737100466584
Condition 3: 24 Hour
Replicate 10.24272092767327
Replicate 20
Replicate 30.56048987566925


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_395605.p1 GENE.S_Transcript_395605~~S_Transcript_395605.p1 ORF type:internal len:90 (-),score=19.11,Plant_tran|PF04827.10|5.7e-29 S_Transcript_395605:2-268(-)
CTATTTGCTGAACATCAAGAAGGTGCAAGAAAAGACGTAGAGCGTGCTTTTGGTGTTTTACAAGCTCGTTTTGCAATTCTCCGCCAACCATCTCTTGTATGGGATAAAGATGTCTTGGGAAATATAATGAAAGCATGCATCATTATGCATAATATGATTGTGGAAGATGAGCGAGATGCAAATCTTGACCATGGTAATACAGAAGAATTTGATGAAGATAATCGGCAATTTCAACCGTCCACCAGCGATGTAAACATGAACGATGGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_395605.p1 GENE.S_Transcript_395605~~S_Transcript_395605.p1 ORF type:internal len:90 (-),score=19.11,Plant_tran|PF04827.10|5.7e-29 S_Transcript_395605:2-268(-)
LFAEHQEGARKDVERAFGVLQARFAILRQPSLVWDKDVLGNIMKACIIMHNMIVEDERDANLDHGNTEEFDEDNRQFQPSTSDVNMNDG

Click here to download the sequence:
Link to NCBI Protein BLAST