Transcript Information: S_Transcript_395676.p1


Annotated TAIR IDAT5G55970.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22668019-22669312 | Forward length=343
E-Value1.2E-149
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.2779974516699
Replicate 27.0872089360732
Replicate 34.6364420321901
Condition 2: 8 Hour
Replicate 11.3700669756817
Replicate 21.0623503544004
Replicate 31.6076197914371
Condition 3: 24 Hour
Replicate 17.505364998165
Replicate 26.3939803609248
Replicate 39.7929166824333


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_395676.p1 GENE.S_Transcript_395676~~S_Transcript_395676.p1 ORF type:complete len:358 (+),score=46.11,zf-RING_2|PF13639.2|9.8e-12,zf-RING_11|PF17123.1|6.9e-11 S_Transcript_395676:326-1399(+)
ATGAAACTTGATCAAAATCAAAGTTTTGTCAAGGAGAATAACACTACTACTACTACTACAACTATTCATGTCATTATGATGAACTCGAGTCTCTCGTCGAGTTATTCTTCAATTAACATTAATCAAGACGAAGAAGAAGAAGAGCAGCATGGTATTGTCGAAAGCAATACGAGTAATATTAGATCAGCAAGGACAACCCCAGCTTCATTGTTAATTAGGTTGGCAATGAGGATATCAAGGGCGAAGTGGTTTAATTTCCTTAGAAGGGTTTTTCATTACCAAAATGGGTCAAGATCTCATCTAGGAGCAAACCCTTTTAATTCTGGCAGTTGGATGGTGCTAGAATTTGTAGCACTTGTGGTTCAAATATGCATATCTTTGATCACCCTCTCTGTTTCTAAGGCAGAGAGGCCTGTTTGGCCTATGAGAATATGGGTTATTGGGTATGATTTTGGTTGTGTTATGAGCCTTTTCATCCTTTATTGGAGGTATAAACATTACCATTTGAGGCAAGGAAATGATGGGTTTTCCCTTCCTGATTTGGAACAACAAAGAAGCCATGAAGATTCAAGGAGCGTGCATGTGGTGAACAAATGCAGGGCATCTCTGGACTTATTCTATGCAATGTGGTTTGTGATGGGGAATGTTTGGGTATTCGATTCACGACTGGGATCCTTCACTCGAGCACCAAAGCTTCACATTCTTTGTATCACCATTCTTGCTTGGAATGCCCTTACTTACTCTTTTCCCTTCCTTTTATTTCTTCTTCTTTGCATTTGTGTTCCTTTAGTTAGTAACCTTATTGGCTATAATATGAGCTTGGGTTCTGCTGAAAAAGGGGCTTCTGATGATCAATTATCCCAGTTACGTTGCTGGAGATTTAAGCAACTTGATCTAAGTGTCGAGACTTCTGCCAAGGAAAATCCGGAATGTTGTATATGTCTGGCCAAGTACAAGGACAAGGAAGAGATAAGGCAATTGCCATGTTCTCATATCTTCCACCAAAAATGTGTGGACCAATGGCTCAGGATTATATCCTGTTGCCCCTTATGTAAACAAGGCTTAGATAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_395676.p1 GENE.S_Transcript_395676~~S_Transcript_395676.p1 ORF type:complete len:358 (+),score=46.11,zf-RING_2|PF13639.2|9.8e-12,zf-RING_11|PF17123.1|6.9e-11 S_Transcript_395676:326-1399(+)
MKLDQNQSFVKENNTTTTTTTIHVIMMNSSLSSSYSSININQDEEEEEQHGIVESNTSNIRSARTTPASLLIRLAMRISRAKWFNFLRRVFHYQNGSRSHLGANPFNSGSWMVLEFVALVVQICISLITLSVSKAERPVWPMRIWVIGYDFGCVMSLFILYWRYKHYHLRQGNDGFSLPDLEQQRSHEDSRSVHVVNKCRASLDLFYAMWFVMGNVWVFDSRLGSFTRAPKLHILCITILAWNALTYSFPFLLFLLLCICVPLVSNLIGYNMSLGSAEKGASDDQLSQLRCWRFKQLDLSVETSAKENPECCICLAKYKDKEEIRQLPCSHIFHQKCVDQWLRIISCCPLCKQGLDK*

Click here to download the sequence:
Link to NCBI Protein BLAST