Transcript Information: S_Transcript_39588.p3


Annotated TAIR IDAT5G11760.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1764, eukaryotic (InterPro:IPR013885); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3789754-3790299 | Forward length=181
E-Value7.8E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.60484093716319
Replicate 20
Replicate 30.62872963921366
Condition 2: 8 Hour
Replicate 10.24233398087651
Replicate 20.50845110544833
Replicate 30.2422255409657
Condition 3: 24 Hour
Replicate 10.49647462478623
Replicate 20.51508662673517
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39588.p3 GENE.S_Transcript_39588~~S_Transcript_39588.p3 ORF type:5prime_partial len:88 (-),score=12.97 S_Transcript_39588:377-640(-)
AAATCAAAGATACAACTAGAAGCAACAAGAACAATCAAAAGGGCAAAGAGGGGTTCCACCAGCATCTTGTTTGCTCAACCCAAGCTCTTCTTCTGTGTAGATAGTAAACCCATCATTTGTCTTTCTCCTAGGCTTCGAATCAGGCGCAAATTCACTTTCTTTAGGGAATTTCCTCTTCTTTTTCTTACCCTTCTTTGGTTTTCCATTCTTTTCTCCAGCTCTTCCAACCTTCTCTTTGTCAGGGTTTGTCCTCTTTTTGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39588.p3 GENE.S_Transcript_39588~~S_Transcript_39588.p3 ORF type:5prime_partial len:88 (-),score=12.97 S_Transcript_39588:377-640(-)
KSKIQLEATRTIKRAKRGSTSILFAQPKLFFCVDSKPIICLSPRLRIRRKFTFFREFPLLFLTLLWFSILFSSSSNLLFVRVCPLFG*

Click here to download the sequence:
Link to NCBI Protein BLAST