Transcript Information: S_Transcript_39590.p1


Annotated TAIR IDAT5G11760.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1764, eukaryotic (InterPro:IPR013885); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3789754-3790299 | Forward length=181
E-Value5.4E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.8897625684416
Replicate 24.1593783592036
Replicate 34.8374389727477
Condition 2: 8 Hour
Replicate 16.817132970231
Replicate 24.5843952130587
Replicate 35.7657620570851
Condition 3: 24 Hour
Replicate 14.4764105513513
Replicate 26.3161442098017
Replicate 34.5482375156767


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39590.p1 GENE.S_Transcript_39590~~S_Transcript_39590.p1 ORF type:complete len:122 (+),score=38.55,DUF1764|PF08576.6|4.7e+02,DUF1764|PF08576.6|2.3e-25 S_Transcript_39590:214-579(+)
ATGCCTAAGAATTCTACTTCGAAAGAGACAACTACCATCACAAAAGAAGAATCCAACGTTGAGCAAGAAAAACAGGGGAATTCATCCAAAAAGAAGGACGAAATTGATGAAATATTCTCAACCAAAAAGAGGAAGAACCCTGACAAAGACAAGGTTGAAGGAGGTGGAGAAAAGAATGGAAAACCAAAGAAGGGTAAGAAAAAGAAGAGGAAATTCCCTAAAGAAAGTGAATTTGCGCCTGATTCGAAGCCTAGGAGAAAGACAAATGATGGGTTTACTATCTACACAGAAGAAGAGCTTGGGTTGAGCAAACAAGATGCTGGTGGAACCCCTCTTTGCCCTTTTGATTGTTCTTGTTGCTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39590.p1 GENE.S_Transcript_39590~~S_Transcript_39590.p1 ORF type:complete len:122 (+),score=38.55,DUF1764|PF08576.6|4.7e+02,DUF1764|PF08576.6|2.3e-25 S_Transcript_39590:214-579(+)
MPKNSTSKETTTITKEESNVEQEKQGNSSKKKDEIDEIFSTKKRKNPDKDKVEGGGEKNGKPKKGKKKKRKFPKESEFAPDSKPRRKTNDGFTIYTEEELGLSKQDAGGTPLCPFDCSCCF*

Click here to download the sequence:
Link to NCBI Protein BLAST