Transcript Information: S_Transcript_39600.p1


Annotated TAIR IDAT3G04490.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38092.1); Has 75 Blast hits to 64 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 36; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:1200816-1209713 | Forward length=1118
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.704737198545
Replicate 26.829410353143
Replicate 36.9616174898544
Condition 2: 8 Hour
Replicate 18.2514407933877
Replicate 28.8102378993936
Replicate 38.3577184074561
Condition 3: 24 Hour
Replicate 18.1143505313299
Replicate 27.73648598092
Replicate 37.7205914086168


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39600.p1 GENE.S_Transcript_39600~~S_Transcript_39600.p1 ORF type:complete len:1163 (+),score=226.50 S_Transcript_39600:225-3713(+)
ATGCAAGGAGATTACAATGATTTGGGTCGTCTTCAATCCATCCTTCATACCATTGAACTTGCTTGCAATTCCATCCAGATGCATGTAAATCCAGCTGCTGCTGAGGCTACTATCTTGTCCCTCAGTCAATCTCCTCAGCCATATCAGGCTTGCAAATTCATTCTTGAGAACTCGCAACTAGCAAATGCAAGGTTTCAGGCTGCAGGTGCAATTCGAGATGCAGCTCTCAGAGAATGGGGAATCCTGACATCTGTGGATAAGGGAAGTTTGATTAGTTTCTGCCTGTGCTTTGTTATGCAACATGCTAGTTCTTCTGAGGGTTATGTTCAGGCAAAGGTTTCTTCTGTGGCTGCTCAATTACTGAAAAGGGGTTGGCTAGAGTTCACATCTGTTGAAAAGGAGGCATTTCTTTTTCAGATTAAACAGGCAATTACTGGCAGTCATGGTGTGGATGTGCAATTCACTGGGATCAACTTCCTGGAATCCCTGGTATCTGAATTTTCGCCTGCTACTTCGACTGCCATGGGTCTTCCCAGAGAGTTCCATGAGCAGTGCAGGATGTCACTGGAGCTACATTACCTGAAGACATTCTACAGTTGGGCACAGGAAGCTGCTGTAGGTGTTACTGATAAAATAGTTCAATCTACTTCTGAGGTTCCTGAGGTGAAAGTTTGCACTGCTGCCTTGCGTCTGATGCTTCAAATTTTGAACTGGGATTTCCGCTATAGTTCCGGAGACAGTGCAACAACCAATATAGATGTTTTTTCTGCTGAAGTCAGACATGAATCTGCCTATTCTAGGAGATCTGAATGTATCGTAGTGCAGCCTGGGTCTTCATGGAAGGAGATATTATTGTTAAGCGGGCATGTCAGTTGGCTGTTGAACCTTTATGGAGCTTTGAGGCATAAGTTTTCACTTAAAGGCTACTGGCTCGATTGCCCCATCGCAGTTGCTGCACGGAAGCTCATTGTACAGTTTTGCTCATTGACTGGAAACATATTTCCTTCAGATGAGGGTCAAATGCTGGAACACCACTTAGTACAATTGCTATCTGGAATTATCCAATGGGTTCACCCTCCCGATGTCATTTCTAGGGCGATTGAGTGCGGGAAAAGTGAAAGTGAGATGCTGGATGGTTGCCGTGCATTACTGGCTGTAGCAACTATAACTTCACCATTTGTGTTTGATCGGCTCTTGAAATCCATATGCCCATTTGGAACAATTGCCTTATTATCTGCCCTGATGAGTGAAGTTATTAAGGCTTTTGTGAGTAATAACACTGATGAAGAGACATGGAGTTGGGTAGCACGTGATATCTTGTTAGATACATGGACAGCCCTTCTTGCACCTACTGGGAGTAGCAGTGGGAATCCATCGCTCCCCTCAGAAGGGATAAGTGCCGCAGCTAATATATTTGTGTTGATTGTAGAGTCTGAGCTAAAAGTGGCCTCTGCGTCAGCATTCAACGATGACGATGGCAGTGACTACCTCCAGGCTTCAATTTTCGGCATGGATGAAAGGTTGAGTTCTTATGGTCTGATTGCAAGGTCATCCATTGAGTATTCAGTTCCTTTCCTTGAAAAACTATTTTCAGAACGCTTTGCACGCCTTCATCAGACCAGAGGCTTATCTGATCCAACTGCTACCCTTGAAGAAGTTTACTCACTTTTACTGATATCTGGACATGTTCTTGCGGATGAAGGAGAAGGGGAATTACCGTTGGTTCCAGAGGCAATACAAATGCACTTTGCAGATAACACAGAGGGGGATAAGCATCCAGTAGTTGTACTTTCCAGTTCAATTTTACGATTTGCTGAGCAGAGTATTGATCCAGAAATCAGAGCATCAATTTTCAGTCCTCGTCTTATGGAGGCAATTATATGGTTTCTTGCTCGGTGGTCCCGTACATATCTATTACCTCCTGGGAATAGTTGCAACAATCAAGGAGGTTCAGTCCAGGACAAGCTTCAACTTTCCAGAAAGGCTTTATCTGACTTCTTTGGAGAGCACAATCAAGGAAAAGCTGTACTCGACCTTATTGTTCGGATATCCATGACAACATTGATTTCGTATCCTGGGGAGAAGGATTTGCAGGAACTTACTTGTCGCCATCTTCTCCAAGGACTTGTTCGACGCAAGGATATTTGTACTCACCTAGTTTCCTTGGACTCATGGCTTGATTTTGCTAAATCTTTTGCCAATGAGAGAGCTCTATTCTCACTGACCGCTCATCACCAACGGGCTCTTGCACGAGCTCTTGTTCGTTCAGCTTCTGGGTTGAAAACTTCTGAAACATCAAATCAGTATGTTAGGGGTCTGATGAATCATATGACAGACTATCTTGGGGATTTGTCTGCCAAGCATGATCTAAAGGATGTCTCTCAGCAGCCAGAGACTATCATGGTGGTATGTTGCCTATTGGAGCGATTACGTGGAGCTGCTAGTGCCTCAGAACCCCGGACACAGAAAGCAATCTACGAGATGGGGTTTTCAGTGATGAACCCTGTTCTGACACTTGTTGAAGTTTACAAGCATGAGTCTGCAGTTGTCTATCTCCTGCTCAAGTTTGTCATTCAGTGGTTGGATGGCCAAATTATTTACCTAGAGGCTAAAGAGACAGCAGCTCTCATTGACTTCTGTATGCGGTTGCTTCAGATGTACTCGTCCCATAATATTGGAAGGATTTCATTAAGTCGTTCTAGCACCTTAGAAAATGAAGCAAAGACAGAGAAATATAAGGACTTGCGTGCTTTGATTCAACTTCTTGCAAATCTCTGCTCAAAAGATCTGATCGACTTCTCAACCGACTCTATTGAGTCACAGGGTATAAGTATCGCTCAGGTTGTATATTATGGTCTCCACATAATCACACCTTTGATATCCCTTGATCTTCTGAAGTATCCCAAGTTGTGTCGCGATTACTTCTCACTCATATCTCATATGTTGGAGGTTTATCCAGAAATGGTTGCTCAACTAAATGCTGATGCCTTTGCTCATGTACTTAGGACTTTAGACTTCGGTTTACGCCATCAGGATTCAGAATTCGTGGACAAATGCCTCAGAGCTCTGAAAGCACTTGCTTCATATCATTATAAGGAGATGACCTCTGGAAAGGTCGGTTTAGGGTCACATGCTGGTGGTTTCAAGGATTCAGATGGGAAGTTTCAAGAAGGCATTTTAACCCGCTTCCTTCCTTCATTGATACAGTTGCTTCTGTTTGAAGATTACTGCACTGATCTGGTGAGTGCAGCAGCAGATGCTCTCCTCCCATTGATTCTTTGTGAGCAAAGTCTATATCAGCGATTGTGCAGTGAGTTGATTGAGAAGCAGACGAATCCAACATTCAAGACGAGGCTAGCAAATGCATTACATTCTCTCACAAGCTCAAACCAGTTATCTTCAACCCTTGATCGTATAAACTACCAACGATTCAGGAAGAATTTACATAGTTTTTTAGTAGAGGTCCGTGGATTCCTACGGACAGTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39600.p1 GENE.S_Transcript_39600~~S_Transcript_39600.p1 ORF type:complete len:1163 (+),score=226.50 S_Transcript_39600:225-3713(+)
MQGDYNDLGRLQSILHTIELACNSIQMHVNPAAAEATILSLSQSPQPYQACKFILENSQLANARFQAAGAIRDAALREWGILTSVDKGSLISFCLCFVMQHASSSEGYVQAKVSSVAAQLLKRGWLEFTSVEKEAFLFQIKQAITGSHGVDVQFTGINFLESLVSEFSPATSTAMGLPREFHEQCRMSLELHYLKTFYSWAQEAAVGVTDKIVQSTSEVPEVKVCTAALRLMLQILNWDFRYSSGDSATTNIDVFSAEVRHESAYSRRSECIVVQPGSSWKEILLLSGHVSWLLNLYGALRHKFSLKGYWLDCPIAVAARKLIVQFCSLTGNIFPSDEGQMLEHHLVQLLSGIIQWVHPPDVISRAIECGKSESEMLDGCRALLAVATITSPFVFDRLLKSICPFGTIALLSALMSEVIKAFVSNNTDEETWSWVARDILLDTWTALLAPTGSSSGNPSLPSEGISAAANIFVLIVESELKVASASAFNDDDGSDYLQASIFGMDERLSSYGLIARSSIEYSVPFLEKLFSERFARLHQTRGLSDPTATLEEVYSLLLISGHVLADEGEGELPLVPEAIQMHFADNTEGDKHPVVVLSSSILRFAEQSIDPEIRASIFSPRLMEAIIWFLARWSRTYLLPPGNSCNNQGGSVQDKLQLSRKALSDFFGEHNQGKAVLDLIVRISMTTLISYPGEKDLQELTCRHLLQGLVRRKDICTHLVSLDSWLDFAKSFANERALFSLTAHHQRALARALVRSASGLKTSETSNQYVRGLMNHMTDYLGDLSAKHDLKDVSQQPETIMVVCCLLERLRGAASASEPRTQKAIYEMGFSVMNPVLTLVEVYKHESAVVYLLLKFVIQWLDGQIIYLEAKETAALIDFCMRLLQMYSSHNIGRISLSRSSTLENEAKTEKYKDLRALIQLLANLCSKDLIDFSTDSIESQGISIAQVVYYGLHIITPLISLDLLKYPKLCRDYFSLISHMLEVYPEMVAQLNADAFAHVLRTLDFGLRHQDSEFVDKCLRALKALASYHYKEMTSGKVGLGSHAGGFKDSDGKFQEGILTRFLPSLIQLLLFEDYCTDLVSAAADALLPLILCEQSLYQRLCSELIEKQTNPTFKTRLANALHSLTSSNQLSSTLDRINYQRFRKNLHSFLVEVRGFLRTV*

Click here to download the sequence:
Link to NCBI Protein BLAST