Transcript Information: S_Transcript_39614.p1


Annotated TAIR IDAT1G05780.1
Annotated Gene NameVacuolar ATPase assembly integral membrane protein VMA21-like domain
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:1726761-1728180 | Forward length=106
E-Value8E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.388137193487
Replicate 231.701872373905
Replicate 326.142130759279
Condition 2: 8 Hour
Replicate 136.439501901121
Replicate 236.924410376248
Replicate 333.525896233078
Condition 3: 24 Hour
Replicate 126.722867182669
Replicate 232.345439822554
Replicate 328.895157667997


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39614.p1 GENE.S_Transcript_39614~~S_Transcript_39614.p1 ORF type:complete len:103 (+),score=20.46,VMA21|PF09446.6|5.4e-19 S_Transcript_39614:307-615(+)
ATGGCGACAATGGCAGAAACAGTGAAGAAGTTTTTCATTGCCTCAATGTTTATGTGGATATTGCCTATAGCTATCGTATATAGCTTTCAACATGATTGGTTTTCCGGTCTGATACAGGTTTCACCTTATTACCAGACACTATTGGGTGGATTTCTTGCTGTTATATCAGTTAATGTGGTAATTGCATTGTACATATGCATGGCAATGAAAGAGCCTTCAGATAAGCATGAACCAGATCCTGCATTTGTTGCCAAGGCTAAAGCCAGTCTGAATCAGTCTAAACCTGGGAATAGTGAAAAGGAAGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39614.p1 GENE.S_Transcript_39614~~S_Transcript_39614.p1 ORF type:complete len:103 (+),score=20.46,VMA21|PF09446.6|5.4e-19 S_Transcript_39614:307-615(+)
MATMAETVKKFFIASMFMWILPIAIVYSFQHDWFSGLIQVSPYYQTLLGGFLAVISVNVVIALYICMAMKEPSDKHEPDPAFVAKAKASLNQSKPGNSEKEE*

Click here to download the sequence:
Link to NCBI Protein BLAST