Transcript Information: S_Transcript_396269.p1


Annotated TAIR IDAT3G53540.1
Annotated Gene Nameunknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3741) (TAIR:AT4G28760.2); Has 1710 Blast hits to 868 proteins in 206 species: Archae - 2; Bacteria - 409; Metazoa - 304; Fungi - 204; Plants - 304; Viruses - 2; Other Eukaryotes - 485 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19846805-19850670 | Reverse length=924
E-Value1E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1634098900625
Replicate 20.48224676628448
Replicate 30.70545985019237
Condition 2: 8 Hour
Replicate 11.6314506253544
Replicate 21.3447559291639
Replicate 31.0483203740155
Condition 3: 24 Hour
Replicate 10.95496758428827
Replicate 20.99076771918458
Replicate 30.27565075852586


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_396269.p1 GENE.S_Transcript_396269~~S_Transcript_396269.p1 ORF type:internal len:183 (+),score=46.01,DUF4378|PF14309.2|2.6e-15 S_Transcript_396269:3-548(+)
TGTGTGGCATCTCAACCAGCATCTCCTGTGAGCAGCAAGGAGACTGAGCAACCTAGTCCTGTTTCAGTACTGGAAGCTTCTTTTACTGAAGAACTCTCATCTGGTTCAGAGTGTTTTGAGCGAGTCAGTGCTGAGCTTCATGGTAAAAATCTTTCAGCATTTTTATCAGGGTTAAGAATGCAACTTCAGCTCCTGAGACTGGAATCTCAAGCATATAACGAAGGTTCTATGATTGTCTCCAGTGGTGACGATAAGGAATCTTCGATTGATCATCATGATTGCGGGGGATATCTTGGAGTTGGGGAGAGCTGGGAATCATCTTATTTGGTAGATGTACTGGCTAGAGCAGGAATTGACGAAACAAATCCTGATTTGTTTCTTGGGACTTGGCACTCTCCAGATTGTCCTGTTGCCCCTTGGGTTTTCGAAACTCTTGAGAAGAAATATCTTGCATGGGAATCATGTTTGACGTCAGAGAGAAAGCTGCTGTTTGATAGTATAAATTCTGCCATCATAGAAATTTCCAGGAATTTTGTAGATCTGCAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_396269.p1 GENE.S_Transcript_396269~~S_Transcript_396269.p1 ORF type:internal len:183 (+),score=46.01,DUF4378|PF14309.2|2.6e-15 S_Transcript_396269:3-548(+)
CVASQPASPVSSKETEQPSPVSVLEASFTEELSSGSECFERVSAELHGKNLSAFLSGLRMQLQLLRLESQAYNEGSMIVSSGDDKESSIDHHDCGGYLGVGESWESSYLVDVLARAGIDETNPDLFLGTWHSPDCPVAPWVFETLEKKYLAWESCLTSERKLLFDSINSAIIEISRNFVDLH

Click here to download the sequence:
Link to NCBI Protein BLAST