Transcript Information: S_Transcript_396436.p1


Annotated TAIR IDAT3G59850.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:22109343-22111566 | Reverse length=388
E-Value4.1E-102
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.11142823008846
Replicate 30.37258052694143
Condition 2: 8 Hour
Replicate 10
Replicate 20.11298913454407
Replicate 30.21531159196951
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.1273840626521


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_396436.p1 GENE.S_Transcript_396436~~S_Transcript_396436.p1 ORF type:5prime_partial len:198 (+),score=19.94,Glyco_hydro_28|PF00295.13|6.3e-57 S_Transcript_396436:3-596(+)
GTTTTGGACGGCCAGGGTGCCGGGTTGTGGGCTTGTAAGAAGTCCGGCAAGGGCGGGTGCCCAGGTGGTGTTACAAACCTAAGCTTCACAAATGCGATGAACATAGTGATAAAGAGGCTAACATCACTAAACAGCCAATTGTACCACATAGTTTTTAATGGATGCAAAAACGTCAAAGTGCAAGGCGTAAAAGTGTCAGCTTCGGGTGCAAGCCCTAACACAGATGGGATTCACGTACAGTTTTCAACGGGTGTGACGATTCAAAGCACTCATATTGGCACCGGTGATGATTGTATTTCTATTGGTGCTGGCACTACTAACATGTGGATGGAGAACATCATTTGTGGACCTGGTCATGGTATTAGCATTGGAAGTCTGGGAAAGGATCTAAATGAGCCTGGAGTGCAAAATATAACAGTGAAAACTGCAACATTTGTTGGAACTCAAAATGGAGTGCGCATCAAGTCTTGGGGAAGACCAAGTAATGGCTTTGTGAGGGATGTGTTGTTTCAACACATTACCATGGTGAATGCCCAAAATCCCATCATCATTGACCAAAATTACTGCCCTGGTGACAAGGGTTGCCCTGGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_396436.p1 GENE.S_Transcript_396436~~S_Transcript_396436.p1 ORF type:5prime_partial len:198 (+),score=19.94,Glyco_hydro_28|PF00295.13|6.3e-57 S_Transcript_396436:3-596(+)
VLDGQGAGLWACKKSGKGGCPGGVTNLSFTNAMNIVIKRLTSLNSQLYHIVFNGCKNVKVQGVKVSASGASPNTDGIHVQFSTGVTIQSTHIGTGDDCISIGAGTTNMWMENIICGPGHGISIGSLGKDLNEPGVQNITVKTATFVGTQNGVRIKSWGRPSNGFVRDVLFQHITMVNAQNPIIIDQNYCPGDKGCPG*

Click here to download the sequence:
Link to NCBI Protein BLAST