Transcript Information: S_Transcript_396579.p1


Annotated TAIR IDAT3G15355.1
Annotated Gene Nameubiquitin-conjugating enzyme 25
Annotated Gene Symbol(s)UBC25, PFU1
Annotation TypeOrtholog
Chromosome Positionchr3:5183858-5186669 | Forward length=609
E-Value1.5E-72
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.30766475416394
Replicate 20
Replicate 30.10660541088787
Condition 2: 8 Hour
Replicate 10.61634076061078
Replicate 20.90521930912189
Replicate 30.86249094355416
Condition 3: 24 Hour
Replicate 10.50508401134322
Replicate 20.26200938238552
Replicate 30.14579216419142


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_396579.p1 GENE.S_Transcript_396579~~S_Transcript_396579.p1 ORF type:3prime_partial len:173 (-),score=10.94,UQ_con|PF00179.22|1.3e-25 S_Transcript_396579:2-517(-)
ATGACTTCAAAAAACAAAGAACCCCAACAATTCCCTCAATTCGACGTCGTATCAGAAGTATCCGACCAACACTTCGCCGGTGACTCATCAAAAGCATCAAACTTGGTCCACAAAAAGATCATGCAAGAATGGAAGCTTTTAGATAAGAACTTACCCGACTCAATATTTGTTCGGGTCTATGAGACCCGGGTCGACCTTCTTCGGGCTGCTATTGTTGGTGCCCGTGGTACTCCTTATCATGATGGGCTTTTCTTCTTTGATATCCACTTTCCATCGGATTACCCGGCCCGACCGCCTTCGGTTTATTACAAATCTTTTGGGCTCCGGATTAATCCTAATCTTTATTCTAATGGTCGGGTTTGTCTCAGCCTTCTTAATACTTGGACCGGTAAAAAGTCCGAGAAGTGGGACCCTAATAGCTCCAACATCCTCCAGGTGCTGCTTTCAATCCAAGCCTTGGTCCTGAATGAGAAACCATACTTCAATGAACCTGGTTTTGGGGCAATGTCTGGCAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_396579.p1 GENE.S_Transcript_396579~~S_Transcript_396579.p1 ORF type:3prime_partial len:173 (-),score=10.94,UQ_con|PF00179.22|1.3e-25 S_Transcript_396579:2-517(-)
MTSKNKEPQQFPQFDVVSEVSDQHFAGDSSKASNLVHKKIMQEWKLLDKNLPDSIFVRVYETRVDLLRAAIVGARGTPYHDGLFFFDIHFPSDYPARPPSVYYKSFGLRINPNLYSNGRVCLSLLNTWTGKKSEKWDPNSSNILQVLLSIQALVLNEKPYFNEPGFGAMSGN

Click here to download the sequence:
Link to NCBI Protein BLAST