Transcript Information: S_Transcript_397185.p1


Annotated TAIR IDATMG00860.1
Annotated Gene NameDNA/RNA polymerases superfamily protein
Annotated Gene Symbol(s)ORF158
Annotation TypeHomolog
Chromosome PositionchrM:235916-236392 | Forward length=158
E-Value1E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2454986251422
Replicate 21.3486327905262
Replicate 31.2682683839725
Condition 2: 8 Hour
Replicate 10.73325124299598
Replicate 20.61965960893226
Replicate 30.61076927234904
Condition 3: 24 Hour
Replicate 11.0849416824364
Replicate 21.6234822046094
Replicate 31.782646882501


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_397185.p1 GENE.S_Transcript_397185~~S_Transcript_397185.p1 ORF type:3prime_partial len:1047 (+),score=52.84,RVT_1|PF00078.23|6.2e-30,zf-CCHC|PF00098.19|1e-06,RVP|PF00077.16|1.5e-05 S_Transcript_397185:204-3140(+)
ATGGGGACAGACACCATTCCTTTCCAAGATATAGCTTGGGGACCTTTATTTCAATTTATCAAAACAGAGGCCATAAACCTTTATAATGAGCTAAAGCTTAACGCCAAATATGGACATGATAGGAAGAATATCAAAAGAGAAATAGGTAATTTTTGCGAATCCTTTGGACTCGAACCCATTAGAGCTCCTTCTACAAAGAAAAAGAAAGCTTTTAGGCATACCAATACCTTTCGGAAACCTCGAAGGACAATACCTTCCGATAATACCAATACAAAGCAAAAGGTCTATTCCAAGAAGAAACGTACCTCTTCAAAACCCAAAGTCACCTGTTACAAGTGTGGCAAACCTGGTCATATAGCCAAAAACTGCCTTAAATGGCAGAAGTTTAAAAGACGGATCCAAGAAATAGAAGATCCAAAATTACGAGAAATTTTAGAGACCACTCTAGCTCCCTCAGCGTCAAGTGACGAAGAAAATTCTTCGTCTTCAGAAAACGATTTGGCAGGACTAGACATTAATAACCTAGATTTTGAAAATTCCTCGGAAGATGACGAATCATCTTCTACTGAACCAGAAATTTTCCAGGAAGTTAGTGTTCTTACCAAAGATAGAGACATTGAAAATGTTTTTCGCATCATAGAGAAGATCCAAAATACTGATATCCAATTAGATCAACTTCAAAAATTAAGAGAAATCCTTATACAGGATGAAAAGGAAAAATATTCTCACATAGAGAATGTTACCCTTAAAGATATCTTAAAACAAGTTCCCAATTCTCTTAAGCCATTAACCCTTAGAGACCTTCAGGAAGAAGTCAACAAATTAGATACCCAAATCACGAGACTGAAGGATGAACTAGGACCCATTAAACTAAAAAATATAGAGTTGGAATCTCGTGTAACCCTCCTAGAAAATGACAAATCGCTTGATCAACCCGAGTCAAGCCATCGACGAAGTAATCTACCTCCTTACGAGGATGCGGATTCAAACGCTATCGCCATTACCGCCCTTACCAAGGTCCCTTATCAAAAATGGCTTACCCCTATTAAGATAAGACTAAGCCCTAATTTTGAAATTAACGAAATTGCTCTTATTGACAGTGGAGCAGACCAAAACTGTATCAAAGAGGATCTTGTTCCTCTAAATTTCAAAGAGAAAACCTTTGAAGCTCTTTATGCAGCTAATGGTCAGCAGCTGAAGATCGATTACAAATTGCCTACTGCTAGTATTATCAACAATGGTTACACAATCAAGACCTCATTTATGTTAATCAAACAGATGAACAACAGAGTTATTCTTGGAACGCCCTTCTTAACCCAAATTTATCCTTTTTCCATAAATCAAAACGGCTTGCGCTCAGACATTTTGGGTCGAACTATCCATTTTCCATTTCTCACAAAAATTAGTCAAGTGGAAATAGAACTTTTACAGTCTAATACAATATTCCAGCAAGTCAACCAAATATCATCCCTAACCAAAGTCAAAAGACTTCTTACTCACGAGATTACCCATGAACGGGTCGATCATCAGCTGCAGAATCCAGTCATCCAAAACAAGATTTCGATTTTAGAAGAACAAATGAAACGAGAAATTTGTTCTACCCTACCTAATGCTTTTTGGAGTCGAAAGAAGCATACGGTGGATTTGCCTTATGAGAAGGATTTCGATGAAAGACAAATACCAACCAAAGCTAGACCCATACAAATGAACCATGATTGGTTGGAACTTTGCAAAAAAGAAATTCAAGACCTTTTAGATAAAGGACTAATTCGACCTTCTAAGAGTCCTTGGTCCTGTGCGGCTTTCTATGTCTACAACCAAGCTGAAAAGGAACGAGGTGTTCCTCGATTAGTCATTAATTACAAACCCTTAAATAAGGTTTTGAAATGGATTAGATATCCGATTCCTAATAAAAGAGATCTTTTAAAACGTTTGCATTCATCAAAAATTTTTAGTAAGTTCGATATGAAATCCGGATTTTGGCAAATCCAGATTAATGAAAAAGACAGATACAAAACAGCTTTTAACGTTCCATTTGGACAATACGAATGGAATGTAATGCCTTTTGGTTTGAAAAATGCTCCTTCTGAATTTCAAAACATTATGAACGATATTTTCAACCCTTATACCTTATTCATTATAGTTTATATTGATGATGTTTTAATCTTTTCAGATTCTTTAGATCAATATTTTAAACATTTACAAACATTTCTTTATATAGTAAAGAAGAACGGACTGGTCGTTTCTCCAACTAAGATCAAACTATTTCAGACAAATATTCGTTTTCTCGGTCATGAGATATACCGAGGCACTATCAAACCTATTTCTAGATCTCTTGAGTTTACAGACAAGTTTCCTGATGAAATTCGAGACAAAACTCAATTACAAAGATTTTTAGGGTGTTTAAATTACGTTTCAGATTTCTTTCCTAACCTTAGACAAATATGTAAACCACTTTATCAGCGTTTACAAAAGAACCCTGTTCCTTGGACAGATTTGCATACAAATACAATTCGAACTTTGAAATCCAAGATTAAAACTTTACCCTGTATCGCAATTCCAAACCCTCTAGCAAGTCTTATAGTCGAGACCGATGCTTCAGACATAGGATTTGGAGGAATACTTAAGCAAAGGTTACCCAATGAAAAGAAAGAAACTTTAGTACGGTACCACTCAGGTCTTTGGAATCCATCTCAACAGAATTATTCTATAATCAAAAAGGAATTACTTTCTGTTGTGCTAAATGTTACAAAATTTCAAGATGATCTCTTCAATAAACATTTCCTTATTCGTGTTGATTGTAAATCCGCAAGAAGCGTTTTACTCAAAGATGTTAAAAATTTAGTATCAAAACAAATATTTGCAAGATGGCAAGCTATATTATCTGCCTTTGATTTTGATATTGAGATTATTAAAGGAGATACAAATTATATTCCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_397185.p1 GENE.S_Transcript_397185~~S_Transcript_397185.p1 ORF type:3prime_partial len:1047 (+),score=52.84,RVT_1|PF00078.23|6.2e-30,zf-CCHC|PF00098.19|1e-06,RVP|PF00077.16|1.5e-05 S_Transcript_397185:204-3140(+)
MGTDTIPFQDIAWGPLFQFIKTEAINLYNELKLNAKYGHDRKNIKREIGNFCESFGLEPIRAPSTKKKKAFRHTNTFRKPRRTIPSDNTNTKQKVYSKKKRTSSKPKVTCYKCGKPGHIAKNCLKWQKFKRRIQEIEDPKLREILETTLAPSASSDEENSSSSENDLAGLDINNLDFENSSEDDESSSTEPEIFQEVSVLTKDRDIENVFRIIEKIQNTDIQLDQLQKLREILIQDEKEKYSHIENVTLKDILKQVPNSLKPLTLRDLQEEVNKLDTQITRLKDELGPIKLKNIELESRVTLLENDKSLDQPESSHRRSNLPPYEDADSNAIAITALTKVPYQKWLTPIKIRLSPNFEINEIALIDSGADQNCIKEDLVPLNFKEKTFEALYAANGQQLKIDYKLPTASIINNGYTIKTSFMLIKQMNNRVILGTPFLTQIYPFSINQNGLRSDILGRTIHFPFLTKISQVEIELLQSNTIFQQVNQISSLTKVKRLLTHEITHERVDHQLQNPVIQNKISILEEQMKREICSTLPNAFWSRKKHTVDLPYEKDFDERQIPTKARPIQMNHDWLELCKKEIQDLLDKGLIRPSKSPWSCAAFYVYNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNKRDLLKRLHSSKIFSKFDMKSGFWQIQINEKDRYKTAFNVPFGQYEWNVMPFGLKNAPSEFQNIMNDIFNPYTLFIIVYIDDVLIFSDSLDQYFKHLQTFLYIVKKNGLVVSPTKIKLFQTNIRFLGHEIYRGTIKPISRSLEFTDKFPDEIRDKTQLQRFLGCLNYVSDFFPNLRQICKPLYQRLQKNPVPWTDLHTNTIRTLKSKIKTLPCIAIPNPLASLIVETDASDIGFGGILKQRLPNEKKETLVRYHSGLWNPSQQNYSIIKKELLSVVLNVTKFQDDLFNKHFLIRVDCKSARSVLLKDVKNLVSKQIFARWQAILSAFDFDIEIIKGDTNYIP

Click here to download the sequence:
Link to NCBI Protein BLAST