Transcript Information: S_Transcript_397221.p1


Annotated TAIR IDAT1G77960.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28630.4); Has 13187 Blast hits to 6837 proteins in 407 species: Archae - 0; Bacteria - 447; Metazoa - 4509; Fungi - 1333; Plants - 399; Viruses - 45; Other Eukaryotes - 6454 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:29310465-29312973 | Reverse length=420
E-Value0.0006
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.23551328526708
Replicate 20.19524592528774
Replicate 30
Condition 2: 8 Hour
Replicate 10.37744053658643
Replicate 20
Replicate 30.75454327805244
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.22320393278864


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_397221.p1 GENE.S_Transcript_397221~~S_Transcript_397221.p1 ORF type:5prime_partial len:113 (+),score=19.70 S_Transcript_397221:2-340(+)
CCAGTCCACTACTCACCACCAAAACCGGTGTACAAGTCACCACCAGTTCCTAGGCACCCATCACCAACACCAATTTACAAGTCTCCACCAGTTCACTACTCACCACCAAAGCCAGTGTACAAATCACCACCAGTTCATAAGTACCCATCACCAACACCAGTTTACAAGTCTCCTCTAGTTCACTACTCACCACCAAAACCTGTATACAAGTCACCACCAATTCCTAAGTACCCCTCACCAACTCCAGTTTACAAATCTCCTCCAGTCTACTACTCACCACCAAAACCTGTATACAAGTCACCCCCTGTTCCTAAATACCCATCACCAACCCCAGTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_397221.p1 GENE.S_Transcript_397221~~S_Transcript_397221.p1 ORF type:5prime_partial len:113 (+),score=19.70 S_Transcript_397221:2-340(+)
PVHYSPPKPVYKSPPVPRHPSPTPIYKSPPVHYSPPKPVYKSPPVHKYPSPTPVYKSPLVHYSPPKPVYKSPPIPKYPSPTPVYKSPPVYYSPPKPVYKSPPVPKYPSPTPV*

Click here to download the sequence:
Link to NCBI Protein BLAST