Transcript Information: S_Transcript_397264.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value4E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.65227944203874
Replicate 20.64890557522102
Replicate 30.18081113807451
Condition 2: 8 Hour
Replicate 10.31360868113431
Replicate 20.43866369881817
Replicate 30.20897889808805
Condition 3: 24 Hour
Replicate 10.32124828662638
Replicate 20.66658269342198
Replicate 30.49454989029639


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_397264.p1 GENE.S_Transcript_397264~~S_Transcript_397264.p1 ORF type:complete len:204 (+),score=32.35,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|6.1e-16,zf-RVT|PF13966.2|2.6e+03 S_Transcript_397264:98-709(+)
ATGGACCAAATGAGTAGATGGATGAGTCGAGTTCAATGGGCTAGTTGGATGGTTAGGAAAGTTCTCCAAGCTCAGAAGGTAAAGGAGATTTTGGGTGATGATATAGCAAATGTAACTTCTCATGGTAAACTCTCTATTAGAAAGGTGTATTTGTGCATGCTAGGAGAGTTCCCTAAGGTCCATTGGAGGAAAATTATTCTCTCCAAAAAGGCTAGACCTAGAGCTATCCTGACTATGTGGATGTTATTTTGGGGAAGATTACAAACATCAGATAGACTACAGAAATGGGGAGTGGCTGTGCAAAGTGAGAGTGTTTTGTGCCACAATGCCGAGGAAACTGCTGATCATATTTTTTATCAATGTGACTTTACAAGGAAGTTATGGAGGAGAATATATACTTGGCATAATATGCCTATGCCCAGAGATATACAGAGCTCTCTGCTGTCAATTGCTAAGAAGAAATCTGCAAAGGCTCGAAAATTTCTCATGGCAGCAGCTAAAGGGATTCATTCTATCTGGCTGGAAAGGAATAATAGAGTTTTCACTCAGGAGAATCAGGGGCTTGATAAGCTTTTTAGAGAGGTCCAATATCATGTGTATTATCGAGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_397264.p1 GENE.S_Transcript_397264~~S_Transcript_397264.p1 ORF type:complete len:204 (+),score=32.35,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|6.1e-16,zf-RVT|PF13966.2|2.6e+03 S_Transcript_397264:98-709(+)
MDQMSRWMSRVQWASWMVRKVLQAQKVKEILGDDIANVTSHGKLSIRKVYLCMLGEFPKVHWRKIILSKKARPRAILTMWMLFWGRLQTSDRLQKWGVAVQSESVLCHNAEETADHIFYQCDFTRKLWRRIYTWHNMPMPRDIQSSLLSIAKKKSAKARKFLMAAAKGIHSIWLERNNRVFTQENQGLDKLFREVQYHVYYRV*

Click here to download the sequence:
Link to NCBI Protein BLAST