Transcript Information: S_Transcript_39827.p2


Annotated TAIR IDAT3G15820.1
Annotated Gene Namephosphatidic acid phosphatase-related / PAP2-related
Annotated Gene Symbol(s)ROD1
Annotation TypeOrtholog
Chromosome Positionchr3:5351217-5353573 | Forward length=301
E-Value1.7E-115
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.165497027401
Replicate 211.680300353978
Replicate 311.52671005225
Condition 2: 8 Hour
Replicate 15.1745432387161
Replicate 24.3592205070056
Replicate 35.4856960748114
Condition 3: 24 Hour
Replicate 16.5052778041843
Replicate 211.498551461529
Replicate 38.5309856076128


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39827.p2 GENE.S_Transcript_39827~~S_Transcript_39827.p2 ORF type:complete len:272 (-),score=31.85,PAP2_3|PF14378.2|7.6e-44,PAP2_C|PF14360.2|7.5e+03,PAP2_C|PF14360.2|1.3e-06 S_Transcript_39827:119-934(-)
ATGGTATTGGATGATATTTCACTGCCCCTACCACGTCATCATATCCCCATTTCATACACGACGCCGTTTCCAACAACAACAACAATGAAAGATAAGAGAGGGGGAATAATGGGGTGGTTGGAAACGGCGTCGTGTATGAAATGGGGATATGATGATGTGGTAGGGGTAGTGAAATATCATCCAATACCATGTATGTTTGCAATGTCCTTGTTGTTCTTCATGGGCGTAGAGTACACGCTTCTTATGGTCCCTTCTTCATCCCCTCCTTTTGATCTGGGTTTTGTTGCCACGCGCTGGCTTAATCGCGTCTTTGCTGCCAGCCCTGCTCTCAACACCATCTGCGCCGCCCTTAATACGGTGTTTGTGGGGATGCAAACGGGGTACATATTCTGGGTGTTTCTAGTGGAAGGAAGGCCAAGACCTGGACTTGCTGCCATGTTTATGTTCACTTGTAGGGGTATTCTTGGTTACTCCACTCAGCTCCCTTTGCCTGAGGACTTCTTGGGTTCAGGTGCAGATTTTCCGGTTGGAAATGTGTCATTCTTCCTCTTCTATTCAGGACATGTTGCTAGCGCTGTGATTGCATCATTGGACATGAGACGCATGCATAGGAAGGCGTTGGCATGGATATTTGATTTCCTTAATGTCTTGCAAGTGGTGAGGCTACTGGGTACAAGAGGTCACTACACGATTGACTTAGGTGTTGGTGTTGGTGCTGGCATCTTGTTCGACTATCTTGCTGGCAAGTATGAGGAGAGCCGGAAAATGTCACTAGGATCTCCTTCCAGCACAATGATCTACTCTCCATTGAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39827.p2 GENE.S_Transcript_39827~~S_Transcript_39827.p2 ORF type:complete len:272 (-),score=31.85,PAP2_3|PF14378.2|7.6e-44,PAP2_C|PF14360.2|7.5e+03,PAP2_C|PF14360.2|1.3e-06 S_Transcript_39827:119-934(-)
MVLDDISLPLPRHHIPISYTTPFPTTTTMKDKRGGIMGWLETASCMKWGYDDVVGVVKYHPIPCMFAMSLLFFMGVEYTLLMVPSSSPPFDLGFVATRWLNRVFAASPALNTICAALNTVFVGMQTGYIFWVFLVEGRPRPGLAAMFMFTCRGILGYSTQLPLPEDFLGSGADFPVGNVSFFLFYSGHVASAVIASLDMRRMHRKALAWIFDFLNVLQVVRLLGTRGHYTIDLGVGVGAGILFDYLAGKYEESRKMSLGSPSSTMIYSPLK*

Click here to download the sequence:
Link to NCBI Protein BLAST