Transcript Information: S_Transcript_39828.p1


Annotated TAIR IDAT3G15820.1
Annotated Gene Namephosphatidic acid phosphatase-related / PAP2-related
Annotated Gene Symbol(s)ROD1
Annotation TypeOrtholog
Chromosome Positionchr3:5351217-5353573 | Forward length=301
E-Value6.6E-114
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 128.368720066668
Replicate 219.534761587383
Replicate 315.304909458266
Condition 2: 8 Hour
Replicate 13.1839992487386
Replicate 23.8063214699535
Replicate 35.1809351817663
Condition 3: 24 Hour
Replicate 17.6608792796875
Replicate 213.220556752869
Replicate 312.435869116411


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39828.p1 GENE.S_Transcript_39828~~S_Transcript_39828.p1 ORF type:complete len:288 (+),score=24.74,PAP2_3|PF14378.2|1e-43,PAP2_C|PF14360.2|9.7e+03,PAP2_C|PF14360.2|3.5e-06 S_Transcript_39828:272-1135(+)
ATGAACAACGGCGTTACTCCCAATGTACTTCGCAATAGAATCTCTCCCTCCATCACCACCACCAACGGCATTAGCCACCATTGTAACGGTAACGGAAAAGCTAACGGTAACGAGGAAGCAAGAAGAACAACAATGAAAGATAAGAGAGGGGGGATAATGGGGTGGTTGGAAACGGCGTCGTGTATGAAATGGGGATATGATGACGTGGTAGGGGCAGTGAAATATCATCCAATACCATGTATGTTTGCAATGTCCTTGTTGTTCTTCATGGGCGTAGAGTACACGCTTCTTATGGTCCCTTCTTCATCCCCTCCTTTTGATCTGGGTTTTGTTGCCACGCGCTGGCTTAATCGCGTCTTTGCTGCCAGCCCTGCTCTCAACACCATCTGCGCCGCCCTTAATACGGTGTTTGTGGGGATGCAAACGGGGTACATATTCTGGGTGTTTCTAGTGGAAGGAAGGCCAAGACCTGGACTTGCTGCCATGTTTATGTTCACTTGTAGGGGTATTCTTGGTTACTCCACTCAGCTCCCTTTGCCTGAGGACTTCTTGGGTTCAGGTGCAGATTTTCCGGTTGGAAATGTGTCATTCTTCCTCTTCTATTCAGGACATGTTGCTAGCGCTGTGATTGCGTCATTGGACATGAGACGCATGCATAGGAAGGCGTTGGCATGGACATTTGATTTCCTTAACGTCTTACAAGTGGTGAGGCTACTGGGTACAAGAGGTCACTACACGATTGACTTAGGTGTTGGTGTTGGTGCTGGCATCTTGTTCGACTATCTTGCTGGCAAGTATGAGGAGAGCCGGAAAATGTCACTAGGATCTCCTTCCAGCACAATGATCTACTCTCCATTGAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39828.p1 GENE.S_Transcript_39828~~S_Transcript_39828.p1 ORF type:complete len:288 (+),score=24.74,PAP2_3|PF14378.2|1e-43,PAP2_C|PF14360.2|9.7e+03,PAP2_C|PF14360.2|3.5e-06 S_Transcript_39828:272-1135(+)
MNNGVTPNVLRNRISPSITTTNGISHHCNGNGKANGNEEARRTTMKDKRGGIMGWLETASCMKWGYDDVVGAVKYHPIPCMFAMSLLFFMGVEYTLLMVPSSSPPFDLGFVATRWLNRVFAASPALNTICAALNTVFVGMQTGYIFWVFLVEGRPRPGLAAMFMFTCRGILGYSTQLPLPEDFLGSGADFPVGNVSFFLFYSGHVASAVIASLDMRRMHRKALAWTFDFLNVLQVVRLLGTRGHYTIDLGVGVGAGILFDYLAGKYEESRKMSLGSPSSTMIYSPLK*

Click here to download the sequence:
Link to NCBI Protein BLAST