Transcript Information: S_Transcript_39845.p1


Annotated TAIR IDAT2G39870.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55690.1); Has 73 Blast hits to 71 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 69; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16643697-16644950 | Forward length=330
E-Value3E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 133.233796664421
Replicate 238.206294111794
Replicate 340.708966233313
Condition 2: 8 Hour
Replicate 112.535168454705
Replicate 29.7126562387106
Replicate 310.190014952625
Condition 3: 24 Hour
Replicate 124.18921245056
Replicate 226.809630767143
Replicate 320.239152705569


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39845.p1 GENE.S_Transcript_39845~~S_Transcript_39845.p1 ORF type:5prime_partial len:410 (+),score=65.17 S_Transcript_39845:3-1232(+)
CCCCTGTTTTTCTCTCTCCCCTTATATTCCGCGAACTCTGCACTGCCCCCACTATCTCACCCTTCCCCCCTCATCTTCTCTCTCGTCATTATTAATTCTTCAACCATCAGCAAAGCCAGCCAAATCCCCCCTCTCACCTCTTTCTTTATATTTAGCGCCGTAAACATTTGCTTGCCCTTATTTGTGCTGGACCATCTTTTCTCTACAAATCACTCTGTTCTTTTCTGGGTTCATTACGTCATTCTATTTGGCTTTATTGTCATGGCCGAAGAGTTGGATGATGGAGAGTTCTGGCTGCCTTCTCAGTTCCTCACTGATGATGATATCCTCATGGACTTCCCCTCTCCCAAGAAGCATGACCTCGGTTCCGGGTTCGGGTCCGGGTCTGATTTGGACTTGCTCTCTTCTTGCTCTGTAACCGGGACTACTGAAACTGGGTCGACTGAAACTGAGAGTGATGAGGACGAGTTGCTCACTGGGTTGACTCACCAGTTCTCTCGCTCTACCCTTAACTCCAAGGAATGGGTGCTGTCAAGCTCGCCACAATCGACCCTATGTGGGTTCATGGGGAAGGAGGGTTCGAGCCGGGGCAGCCCAAACGGGCTGGTGTCACCGAACAAAACTGACGGTGGTGCCACGTGGGATTTGCTCTACAAAGCGGCTGGTGAAGTTGCTAGAATTAAGATGAAGAATGAAACAACTCCAGCTACAACGAAAACTAGCACTGGAACTGGCTTCTTTGATTGTAGTAACAAAGGACTATTATGCCCTCCATCTCTTCCCAGAACTACAACACCTGCTCCTCCCATTTTCTCTCTTCCCCAATTCCCCCCTCTTTCTCATTTGCAGCAAATGAGGATGAGGCAAGTGCCGACAAATGGGCAGCAGCAATTCAACAGATTAACGAGACCCAACAGTAACAACAACCACCACCACAACCGTCCACTGGGCCTGCCGCCATCTGCTTGGCCACCACTCCAGGCCCAAAACCAGCCCATGCCACCCATGTTCACGGCCCAGTCTGGGCCCAAAAGGGAGTCTGTCGGTACCGGTGTTTTCTTGCCTAGGCGTGTCACCACCACTACCACCCCTGAACCCCGCAAGAAGTCTGAAGGGAACCCATCAAAGAGAAGTGGAAAAGGTTCACAAACACAACACCGACGAAACAGTTCAAAACCACCGACAGTGAACCAAGATGAGATCCATCTCCCTCAGGAATGGACCTACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39845.p1 GENE.S_Transcript_39845~~S_Transcript_39845.p1 ORF type:5prime_partial len:410 (+),score=65.17 S_Transcript_39845:3-1232(+)
PLFFSLPLYSANSALPPLSHPSPLIFSLVIINSSTISKASQIPPLTSFFIFSAVNICLPLFVLDHLFSTNHSVLFWVHYVILFGFIVMAEELDDGEFWLPSQFLTDDDILMDFPSPKKHDLGSGFGSGSDLDLLSSCSVTGTTETGSTETESDEDELLTGLTHQFSRSTLNSKEWVLSSSPQSTLCGFMGKEGSSRGSPNGLVSPNKTDGGATWDLLYKAAGEVARIKMKNETTPATTKTSTGTGFFDCSNKGLLCPPSLPRTTTPAPPIFSLPQFPPLSHLQQMRMRQVPTNGQQQFNRLTRPNSNNNHHHNRPLGLPPSAWPPLQAQNQPMPPMFTAQSGPKRESVGTGVFLPRRVTTTTTPEPRKKSEGNPSKRSGKGSQTQHRRNSSKPPTVNQDEIHLPQEWTY*

Click here to download the sequence:
Link to NCBI Protein BLAST