Transcript Information: S_Transcript_398667.p1


Annotated TAIR IDAT5G57750.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23399668-23400300 | Forward length=210
E-Value7.6E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7083690245743
Replicate 20
Replicate 30.60467987159346
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 11.4324513764324
Replicate 21.671920526124
Replicate 31.6539045511552


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_398667.p1 GENE.S_Transcript_398667~~S_Transcript_398667.p1 ORF type:complete len:122 (+),score=22.09,zf-RING_2|PF13639.2|5.8e-12,zf-RING_11|PF17123.1|4.5e-08,zf-RING_11|PF17123.1|3.1e+02,zf-rbx1|PF12678.3|1.7e-05 S_Transcript_398667:355-720(+)
ATGGTAATGGAAATTATCATATCTGTGGTGTTACAGAATGGAAGTATCCCAATAATTAAGGGTAGTACAACAGGAATGAGCCCTAAGGAACTTAAGAAACTTGCTTGTTTTGAGTACAAGGAATTAGGGAGTGGCCCTACTGATTGTGCTGTTTGCTTGGATAACTTTAATTTGGGTGATAAGTGTAGGATACTCCCTAACTGTCACCACTGCTTTCATGTTCTGTGTATTGATGTCTGGTTGATCAAGACCCCCTTTTGTCCCATTTGTCGAACCTCCGCCAAGCCGTCGCCTAAACTTTGCTTGGATGTTGGTGAAGGAAGTAATGCTACATCCAATATTGGTGTTGGAGATGAAATGTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_398667.p1 GENE.S_Transcript_398667~~S_Transcript_398667.p1 ORF type:complete len:122 (+),score=22.09,zf-RING_2|PF13639.2|5.8e-12,zf-RING_11|PF17123.1|4.5e-08,zf-RING_11|PF17123.1|3.1e+02,zf-rbx1|PF12678.3|1.7e-05 S_Transcript_398667:355-720(+)
MVMEIIISVVLQNGSIPIIKGSTTGMSPKELKKLACFEYKELGSGPTDCAVCLDNFNLGDKCRILPNCHHCFHVLCIDVWLIKTPFCPICRTSAKPSPKLCLDVGEGSNATSNIGVGDEML*

Click here to download the sequence:
Link to NCBI Protein BLAST