Transcript Information: S_Transcript_39869.p1


Annotated TAIR IDAT1G67560.1
Annotated Gene NamePLAT/LH2 domain-containing lipoxygenase family protein
Annotated Gene Symbol(s)LOX6
Annotation TypeHomolog
Chromosome Positionchr1:25319926-25324117 | Forward length=917
E-Value1E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.330650061759
Replicate 22.3638703097337
Replicate 33.0957449854615
Condition 2: 8 Hour
Replicate 13.6557811972228
Replicate 23.355777295959
Replicate 33.5780172765504
Condition 3: 24 Hour
Replicate 13.1987150825513
Replicate 22.347323341836
Replicate 31.981732060402


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39869.p1 GENE.S_Transcript_39869~~S_Transcript_39869.p1 ORF type:3prime_partial len:280 (+),score=58.47,PLAT|PF01477.19|4.3e-07 S_Transcript_39869:107-943(+)
ATGAATAGGTATCCTAGCTGCCAGCTAATTTTTCTACATTCTCAGTTTCTTTTGTTTCTCTCTTTAGAAACTTCAAAGATGCTGACAGCAGCCCGGTTGACCTCCTCAGTCAAGCCCAAGCCCAATATCAGTGGGCCATCACCTCACCGGAGGATCCACATCTCCGGAGGTGAAGGTTGGGCTGGGCCGGCCCGGAAGGCCCGGGTGGGAAGTGGGTTGAGAGTGAGGGCAGTGATCAGCAGTGGTGACAGCACAGTGGAAAGTGGTGCACCTTCCAGCTCAGTTACTTTGGAGAGGAATACAAATGGTTCTTTGTTGGGTTTTACTTCTGGTAGCAATAACAGTGGGATTCAATTAAGGGCAGTGGTGGTAATTAGGAAGAAGATTAAGAAAAGATTATCTGACAAAGTTGAAGATCAGTGGTTTTCATTTGTTAATGCTATTGGTCAAGGGATTTTCCTTCAGCTTATTAGTGAAGATATTGATCCTGAAACCAACTCAGGGAAGAGTGTAGAGGCTTATGTGAGGGGCTGGTCACCGAGTTCTTCGACAGAGCATTTGAACATTTTCGAATATACTGCCGACTTTAAAGTTCCTCCTGACTTTGGAACTCCTGGAGCTATTCTCATTACCAATTGTTACAGCAAAGAATTCTATTTGGTTGAAGTTGTTGTACATGGATTCAAGGGTGGACCAACGTTCTTCCCTGCGAATTCATGGATCCATTCTCGAGATGATAATCCTGAAAGCAGAATCATATTCAGAAATCATGCGTATTTGCCATCACAAACACCACCTGGCCTTAAAGACTTGCGAAGAGAGGACTTGCTCTGTCTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39869.p1 GENE.S_Transcript_39869~~S_Transcript_39869.p1 ORF type:3prime_partial len:280 (+),score=58.47,PLAT|PF01477.19|4.3e-07 S_Transcript_39869:107-943(+)
MNRYPSCQLIFLHSQFLLFLSLETSKMLTAARLTSSVKPKPNISGPSPHRRIHISGGEGWAGPARKARVGSGLRVRAVISSGDSTVESGAPSSSVTLERNTNGSLLGFTSGSNNSGIQLRAVVVIRKKIKKRLSDKVEDQWFSFVNAIGQGIFLQLISEDIDPETNSGKSVEAYVRGWSPSSSTEHLNIFEYTADFKVPPDFGTPGAILITNCYSKEFYLVEVVVHGFKGGPTFFPANSWIHSRDDNPESRIIFRNHAYLPSQTPPGLKDLRREDLLCL

Click here to download the sequence:
Link to NCBI Protein BLAST