Transcript Information: S_Transcript_39883.p1


Annotated TAIR IDAT5G22920.1
Annotated Gene NameCHY-type/CTCHY-type/RING-type Zinc finger protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:7665143-7667031 | Forward length=291
E-Value1.1E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.63010309114
Replicate 231.668357800242
Replicate 345.416805865738
Condition 2: 8 Hour
Replicate 117.408481891537
Replicate 225.56782701683
Replicate 322.330887967123
Condition 3: 24 Hour
Replicate 110.699534770903
Replicate 210.175588871013
Replicate 312.182075869138


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39883.p1 GENE.S_Transcript_39883~~S_Transcript_39883.p1 ORF type:complete len:147 (+),score=24.21,zf-CHY|PF05495.8|5.7e-21,zf-CHY|PF05495.8|4.5e+02 S_Transcript_39883:227-667(+)
ATGAGTTGTGGGTGTGAGACCCAATTGGCCTCCATCAATGGCTCAGAACAATTCTTCAAATCTTCAATTGATTTCATGGAGCTTTCAGCTGGGAATTATGGATGCAAGCACTATAGGAGGAGGTGTAAGATTAGAGCACCCTGTTGTAATGAGATATTTGATTGTAGACATTGTCATAATGAAGCCAAGAATTCTCTTGAAATTGATCCTTTGGACCGACATGATATTCCACGCCATGATATTAAAAAGGTGATATGCTCCCTCTGTGGTGAAGAACAAGATGTTCAACAGAACTGCGTCAAGTGTGGGGTTTGCATGGGGAAGTACTTTTGTGCAGTATGCAATTTCTTTGATGACGATGTTTCAAAGAAACAGTATCATTGTCATGACTGTGGAATATGCAGGTACCCATCTTACTATCTTGCTATGTTTTTGTCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39883.p1 GENE.S_Transcript_39883~~S_Transcript_39883.p1 ORF type:complete len:147 (+),score=24.21,zf-CHY|PF05495.8|5.7e-21,zf-CHY|PF05495.8|4.5e+02 S_Transcript_39883:227-667(+)
MSCGCETQLASINGSEQFFKSSIDFMELSAGNYGCKHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLEIDPLDRHDIPRHDIKKVICSLCGEEQDVQQNCVKCGVCMGKYFCAVCNFFDDDVSKKQYHCHDCGICRYPSYYLAMFLS*

Click here to download the sequence:
Link to NCBI Protein BLAST